RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 PTRHD1Q6GMV3 140 aaKnown RBP20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 CUZD1Q86UP6 607 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 BCORP1Q8N888 145 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 PPHLN1Q8NEY8 458 aaKnown RBP20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 LMF1Q96S06 567 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 BARD1Q99728 777 aaKnown RBP20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 PLAGL1Q9UM63 463 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 CDC14AQ9UNH5 594 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 SEC16AO15027 2179 aa20.18■□□□□ 0.82
SQSTM1-210ENST00000506042 BHMG1C9JSJ3 638 aaPredicted RBP20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 RASGRF2O14827 1237 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 USP1O94782 785 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 CLDN1O95832 211 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 ONECUT2O95948 504 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 ACPPP15309 386 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 PSMA3P25788 255 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 NKG7Q16617 165 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 FIGLAQ6QHK4 219 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 KCNMB4Q86W47 210 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 FAR1Q8WVX9 515 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 HDAC10Q969S8 669 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 THOC3Q96J01 351 aaKnown RBP20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 RANBP9Q96S59 729 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 CRB3Q9BUF7 120 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 ZNF304Q9HCX3 659 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 ZNF282Q9UDV7 671 aaPredicted RBP20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 GNPTGQ9UJJ9 305 aa20.17■□□□□ 0.82
SQSTM1-210ENST00000506042 TEX15Q9BXT5 2789 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 PHF2O75151 1096 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 VPS26AO75436 327 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 METTL18O95568 372 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 HPP00738 406 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 PRSS56P0CW18 603 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 RNF224P0DH78 156 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 INAQ16352 499 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 HIF1AQ16665 826 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 MUM1Q2TAK8 710 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 TSTD2Q5T7W7 516 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 IGFL2Q6UWQ7 119 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 LRRC6Q86X45 466 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 OR52K1Q8NGK4 314 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 FLVCR1-AS1Q8TAF5 88 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 GRHL3Q8TE85 626 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 MIEF2Q96C03 454 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 TMEM121Q9BTD3 319 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 SUCOQ9UBS9 1254 aaKnown RBP20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 OSGIN2Q9Y236 505 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 PRSS21Q9Y6M0 314 aa20.16■□□□□ 0.82
SQSTM1-210ENST00000506042 PRMT5O14744 637 aaPredicted RBP20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 LRRTM2O43300 516 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 GOT2P00505 430 aaKnown RBP20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 ARG2P78540 354 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 KIF5AQ12840 1032 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 MFAP5Q13361 173 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 CCDC38Q502W7 563 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 CRB2Q5IJ48 1285 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 RPUSD3Q6P087 351 aaKnown RBP20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 MTFR2Q6P444 385 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 OTOAQ7RTW8 1153 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 TICAM1Q8IUC6 712 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 PARP9Q8IXQ6 854 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 KBTBD2Q8IY47 623 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 MPP5Q8N3R9 675 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 SUN3Q8TAQ9 357 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 NRTNQ99748 197 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 SOX17Q9H6I2 414 aaPredicted RBP20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 CATSPERZQ9NTU4 200 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 OLAHQ9NV23 265 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 HS3ST3B1Q9Y662 390 aa20.15■□□□□ 0.82
SQSTM1-210ENST00000506042 UNC79Q9P2D8 2635 aa20.14■□□□□ 0.82
SQSTM1-210ENST00000506042 COL8A1P27658 744 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 SEL1L2Q5TEA6 688 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 CCDC89Q8N998 374 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 ALG3Q92685 438 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 SPSB2Q99619 263 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 PIH1D1Q9NWS0 290 aaKnown RBP20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 TFR2Q9UP52 801 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 ENTPD4Q9Y227 616 aa20.14■□□□□ 0.81
SQSTM1-210ENST00000506042 NSG1A0A0A6YYJ2 146 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 HYKKA2RU49 373 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 OR51F1A6NGY5 319 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 ZNF839A8K0R7 811 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 SOCS6O14544 535 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 HCRTR1O43613 425 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 CNOT3O75175 753 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 GPC4O75487 556 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 NDUFS3O75489 264 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 CMPK1P30085 196 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 PEBP1P30086 187 aaKnown RBP20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 CCR7P32248 378 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 VSX2P58304 361 aaPredicted RBP20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 KIRREL2Q6UWL6 708 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 NAPRTQ6XQN6 538 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 TAX1BP1Q86VP1 789 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 OTUD6BQ8N6M0 293 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 LMNTD1Q8N9Z9 388 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 SLC35B2Q8TB61 432 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 INPP5DQ92835 1189 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 MVB12AQ96EY5 273 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 MAGEB10Q96LZ2 347 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms