RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 C12orf29Q8N999 325 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF511Q8NB15 262 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AVL9Q8NBF6 648 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 LPAR1Q92633 364 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 USP7Q93009 1102 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM176AQ96HP8 235 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DMRTA2Q96SC8 542 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PDCD2LQ9BRP1 358 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DPY30Q9C005 99 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 NUAK2Q9H093 628 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ELOVL6Q9H5J4 265 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ZFYVE1Q9HBF4 777 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 IFT46Q9NQC8 304 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 DYRK4Q9NR20 520 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM39AQ9NV64 488 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SETD4Q9NVD3 440 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 PRMT7Q9NVM4 692 aaPredicted RBP3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 TOR4AQ9NXH8 423 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 ING3Q9NXR8 418 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 SIRPGQ9P1W8 387 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
PCDH11X-208ENST00000504220 MYO7AQ13402 2215 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KRT87PA6NCN2 255 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MGAT4DA6NG13 374 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MANSC4A6NHS7 340 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CCL22O00626 93 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CXCL11O14625 94 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 TRIM24O15164 1050 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PPM1DO15297 605 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ASNA1O43681 348 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PSIP1O75475 530 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PIAS2O75928 621 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ANXA9O76027 345 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 BEST1O76090 585 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 LDOC1O95751 146 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 F9P00740 461 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GSNP06396 782 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CKMP06732 381 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF286BP0CG31 522 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KELP23276 732 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GLRA2P23416 452 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PCSK1P29120 753 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 AQP1P29972 269 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 HOXA11P31270 313 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 FMO4P31512 558 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 UQCRC1P31930 480 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 FDFT1P37268 417 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SERPINH1P50454 418 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SOX4Q06945 474 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 NOGQ13253 232 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 COL9A2Q14055 689 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SYT16Q17RD7 645 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ARMCX4Q5H9R4 360 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PPM1JQ5JR12 505 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC25A24Q6NUK1 477 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GCNT7Q6ZNI0 430 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 C16orf59Q7L2K0 433 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 OTOP1Q7RTM1 612 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 LUZP2Q86TE4 346 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KLBQ86Z14 1044 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GPALPP1Q8IXQ4 340 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PRSS58Q8IYP2 241 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ULK2Q8IYT8 1036 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ADGRF2Q8IZF7 708 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RBM15BQ8NDT2 890 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 C19orf18Q8NEA5 215 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 OR5B17Q8NGF7 314 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR36Q8NI36 951 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 VANGL1Q8TAA9 524 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PGAP3Q96FM1 320 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SGCZQ96LD1 299 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 TTYH1Q9H313 450 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 POMKQ9H5K3 350 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLA2Q9H6Q3 261 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 POLE4Q9NR33 117 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 AAASQ9NRG9 546 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RASSF1Q9NS23 344 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RCOR3Q9P2K3 495 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RIMS3Q9UJD0 308 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RUVBL1Q9Y265 456 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MICAL3Q7RTP6 2002 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SPTA1P02549 2419 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A087WXM4 84 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 AURKAO14965 403 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PAPSS1O43252 624 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 OAZ2O95190 189 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 LRATO95237 230 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PAPLNO95428 1278 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CNOT4O95628 575 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GLP2RO95838 553 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 FBP1P09467 338 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MLNP12872 115 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 AZGP1P25311 298 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 OR1E1P30953 314 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SHMT2P34897 504 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CHI3L1P36222 383 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 VEGFBP49765 207 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms