RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SCGB2B2Q4G0G5 96 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 LBHQ53QV2 105 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 OR2B11Q5JQS5 317 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 VWA1Q6PCB0 445 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 CRLF3Q8IUI8 442 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 C8orf59Q8N0T1 100 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 KDM8Q8N371 416 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 FBXL16Q8N461 479 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF276Q8N554 614 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 COLGALT1Q8NBJ5 622 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MAP4K1Q92918 833 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 RBPMSQ93062 196 aaKnown RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 YIPF5Q969M3 257 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 RCN3Q96D15 328 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MFSD14AQ96MC6 490 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 SH2D3AQ9BRG2 576 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 TRAF4Q9BUZ4 470 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ZCCHC4Q9H5U6 513 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MEAF6Q9HAF1 191 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 SMURF1Q9HCE7 757 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 POT1Q9NUX5 634 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 M0QZK8 103 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MDM4O15151 490 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 SDC3O75056 442 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ERN1O75460 977 aaKnown RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 PEPDP12955 493 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 NT5EP21589 574 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 GRK5P34947 590 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MCFD2Q8NI22 146 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 HASPINQ8TF76 798 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 KCNJ9Q92806 393 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 MARC2Q969Z3 335 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM143Q96AN5 459 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 C12orf66Q96MD2 445 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 OR1F2PQ96R84 312 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 SNX18Q96RF0 628 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 OR51M1Q9H341 326 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ESRP2Q9H6T0 727 aaKnown RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF395Q9H8N7 513 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-204ENST00000504131 RAB6BQ9NRW1 208 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 ECHDC1Q9NTX5 307 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 TAS2R3Q9NYW6 316 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 GTSE1Q9NYZ3 720 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 NRXN1Q9ULB1 1477 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 IQGAP1P46940 1657 aa6.13□□□□□ -1.43
CLCN3-204ENST00000504131 CD3EAPO15446 510 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ATP1A1P05023 1023 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ANXA7P20073 488 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SLC6A6P31641 620 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 IRS1P35568 1242 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 AHRP35869 848 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CRKP46108 304 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 RSU1Q15404 277 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 AGAP7PQ5VUJ5 663 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 FDX2Q6P4F2 183 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM270Q6UE05 265 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KANSL1Q7Z3B3 1105 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KATNAL2Q8IYT4 538 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SLC35G2Q8TBE7 412 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PIH1D2Q8WWB5 315 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CAVIN3Q969G5 261 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NXPE2Q96DL1 559 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 DPCDQ9BVM2 203 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TSSK1BQ9BXA7 367 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 FSD1LQ9BXM9 530 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MTIF3Q9H2K0 278 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SAR1AQ9NR31 198 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 RBM12Q9NTZ6 932 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 IL17BQ9UHF5 180 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KDM4FA0A1W2PPD8 638 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 EYA2O00167 538 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PHYHO14832 338 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PI15O43692 258 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SNX3O60493 162 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SNAP91O60641 907 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 DNAJA2O60884 412 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MT-CO2P00403 227 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 DHRS4L1P0CG22 281 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PSMB9P28065 219 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 IL6STP40189 918 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 P2RY4P51582 365 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CDC20Q12834 499 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MTMR2Q13614 643 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ATF7IP2Q5U623 682 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GPR157Q5UAW9 335 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MEDAGQ5VYS4 303 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 RIPOR1Q6ZS17 1223 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 UNC5BQ8IZJ1 945 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 OR7G2Q8NG99 324 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 OR9A2Q8NGT5 310 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GRHL3Q8TE85 626 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM203Q969S6 136 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SMIM12Q96EX1 92 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MYNNQ9NPC7 610 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms