RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ATCAYQ86WG3 371 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 RAB43Q86YS6 212 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 FAM20CQ8IXL6 584 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 LINC01555Q8NAE3 123 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 LKAAEAR1Q8TD35 194 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 DLG3Q92796 817 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 BIRC8Q96P09 236 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 CIDEBQ9UHD4 219 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 KLHL20Q9Y2M5 609 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 CRYL1Q9Y2S2 319 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 ZNF451Q9Y4E5 1061 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 PCDHGB7Q9Y5F8 929 aa11.5□□□□□ -0.57
MED28-203ENST00000503945 CTAGE9A4FU28 777 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 E5RI56 91 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 H3BMH7 237 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 SRPX2O60687 465 aaPredicted RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 MLNP12872 115 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 MAGP20916 626 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 PEBP1P30086 187 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 OTX2P32243 289 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 ADARP55265 1226 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 CHAF1BQ13112 559 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 THOC5Q13769 683 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 DHX34Q14147 1143 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 GRB7Q14451 532 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 ESPL1Q14674 2120 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 NKAIN1Q4KMZ8 207 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 TCTE1Q5JU00 501 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 YOD1Q5VVQ6 348 aaPredicted RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 MCUQ8NE86 351 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 FER1L6-AS2Q96M78 137 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 IL17FQ96PD4 163 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 GBP5Q96PP8 586 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 MENTQ9BUN1 341 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 MLXIPLQ9NP71 852 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 IL1RAPL1Q9NZN1 696 aa11.49□□□□□ -0.57
MED28-203ENST00000503945 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 PTRH2Q9Y3E5 179 aaKnown RBP11.49□□□□□ -0.57
MED28-203ENST00000503945 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 FAM237BA0A1B0GVD1 139 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 KLHL41O60662 606 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 MATN4O95460 622 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 PKMP14618 531 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 OGNP20774 298 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 GNLYP22749 145 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 ARNTP27540 789 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 COILP38432 576 aaPredicted RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 FOLR3P41439 243 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 MAGEA6P43360 314 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 KCNJ11Q14654 390 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 GRM7Q14831 915 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 KCTD19Q17RG1 926 aaPredicted RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 ANKRD20A4Q4UJ75 823 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 CPZQ66K79 652 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 FCRL6Q6DN72 434 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 KIAA0930Q6ICG6 404 aaPredicted RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 TTLL10Q6ZVT0 673 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 CAND1Q86VP6 1230 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 HPS6Q86YV9 775 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 CILP2Q8IUL8 1156 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 EFCAB3Q8N7B9 438 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 LMNTD1Q8N9Z9 388 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 FDCSPQ8NFU4 85 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 OR2Y1Q8NGV0 311 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 LPGAT1Q92604 370 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 NACC2Q96BF6 587 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 SELENOSQ9BQE4 189 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 CCDC68Q9H2F9 335 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 XAB2Q9HCS7 855 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 INTS10Q9NVR2 710 aaKnown RBP11.48□□□□□ -0.57
MED28-203ENST00000503945 NFS1Q9Y697 457 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 SPTBP11277 2137 aa11.48□□□□□ -0.57
MED28-203ENST00000503945 SPTAN1Q13813 2472 aaKnown RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 PRICKLE3O43900 615 aaPredicted RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 DPM1O60762 260 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 NIPSNAP2O75323 286 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 VPS4BO75351 444 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 CEACAM4O75871 244 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 CTSBP07858 339 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 HSD17B2P37059 387 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 TYSND1Q2T9J0 566 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 CTSL3PQ5NE16 218 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 TTC27Q6P3X3 843 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 OVCH1Q7RTY7 1134 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms