RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	PCCB	P05166	539 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	PYGL	P06737	847 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	POLB	P06746	335 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	NMBR	P28336	390 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CSF2RB	P32927	897 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	SPAM1	P38567	509 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	MEOX1	P50221	254 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	KIAA1024L	P59773	190 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	IRX4	P78413	519 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	FASTKD3	Q14CZ7	662 aa	Known RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	IRF4	Q15306	451 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	SF3A2	Q15428	464 aa	Known RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	MST1L	Q2TV78	715 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	ANKRD20A4	Q4UJ75	823 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	HENMT1	Q5T8I9	393 aa	Known RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	WDR93	Q6P2C0	686 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CES3	Q6UWW8	571 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	FAM151B	Q6UXP7	276 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CLEC14A	Q86T13	490 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	TMEM135	Q86UB9	458 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CARF	Q8N187	725 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	SLC22A18AS	Q8N1D0	253 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	DCLK2	Q8N568	766 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	TRAM1L1	Q8N609	369 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	PLA2G15	Q8NCC3	412 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZBTB34	Q8NCN2	500 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	FBXO36	Q8NEA4	188 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	OR13J1	Q8NGT2	312 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	PYROXD1	Q8WU10	500 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	HOXB13	Q92826	284 aa	Predicted RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	DACT3	Q96B18	629 aa	Predicted RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CFAP36	Q96G28	342 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CDKN2AIPNL	Q96HQ2	116 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	BMF	Q96LC9	184 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	MYOC	Q99972	504 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZSCAN5A	Q9BUG6	496 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	TSPYL1	Q9H0U9	437 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	IL26	Q9NPH9	171 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	TMEM9B	Q9NQ34	198 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	MBNL1	Q9NR56	388 aa	Known RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	RXFP3	Q9NSD7	469 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	APPL1	Q9UKG1	709 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CHMP2B	Q9UQN3	213 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	RPS6KL1	Q9Y6S9	549 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	TRPM6	Q9BX84	2022 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	CACNA1A	O00555	2505 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	PLXNA2	O75051	1894 aa		7.28	□□□□□ -1.24
GARNL3-222	ENST00000498801	SPTY2D1-AS1	A0A0U1RR47	76 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801		A0A1B0GTL3	188 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801		A0A1B0GTQ1	180 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZCWPW2	A0A1B0GU75	182 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801		A0A1B0GVT2	93 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CCDC162P	A2VCL2	907 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	POM121B	A6NF01	834 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GAPDHS	O14556	408 aa	Predicted RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	SRP72	O76094	671 aa	Known RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	VAPB	O95292	243 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	TTC4	O95801	387 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	TSPAN15	O95858	294 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	SOD1	P00441	154 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GOT2	P00505	430 aa	Known RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CFI	P05156	583 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZNF888	P0CJ79	500 aa	Predicted RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	TSHR	P16473	764 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	MCM3	P25205	808 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	MAGEA4	P43358	317 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GPR1	P46091	355 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CSNK1E	P49674	416 aa	Known RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	RRAD	P55042	308 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CLDN2	P57739	230 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	LINC00310	P59036	64 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	VSNL1	P62760	191 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PRAME	P78395	509 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	XIAP	P98170	497 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PEX6	Q13608	980 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	IL10RA	Q13651	578 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GALE	Q14376	348 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CRYM	Q14894	314 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CHRNA6	Q15825	494 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	KIF19	Q2TAC6	998 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	AASDH	Q4L235	1098 aa	Predicted RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZNF385B	Q569K4	471 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	SPANXN3	Q5MJ09	141 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	STEAP4	Q687X5	459 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PDPK2P	Q6A1A2	396 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	RAET1G	Q6H3X3	334 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	KIAA0930	Q6ICG6	404 aa	Predicted RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PNCK	Q6P2M8	343 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	AFTPH	Q6ULP2	937 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	FAM180A	Q6UWF9	173 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	CCNI2	Q6ZMN8	369 aa	Predicted RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	KDM7A	Q6ZMT4	941 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	MACC1	Q6ZN28	852 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GPR155	Q7Z3F1	870 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PIP4P1	Q86T03	277 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	GSPT2	Q8IYD1	628 aa	Known RBP	7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	PELI3	Q8N2H9	469 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	SNX33	Q8WV41	574 aa		7.27	□□□□□ -1.25
GARNL3-222	ENST00000498801	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms