RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PIH1D1Q9NWS0 290 aaKnown RBP14.07□□□□□ -0.16
TRAF4-212ENST00000498540 IMPACTQ9P2X3 320 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 MAU2Q9Y6X3 613 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
TRAF4-212ENST00000498540 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 QSOX1O00391 747 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 PJA2O43164 708 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 KDM1AO60341 852 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 STK10O94804 968 aaKnown RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 MED26O95402 600 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 HPP00738 406 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 TPM3P06753 285 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 FOXN2P32314 431 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 ARG2P78540 354 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 KLC1Q07866 573 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 ITIH4Q14624 930 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 GRM7Q14831 915 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 ZXDCQ2QGD7 858 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 YOD1Q5VVQ6 348 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 DARS2Q6PI48 645 aaKnown RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 VRK3Q8IV63 474 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 STYXQ8WUJ0 223 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 NR4A3Q92570 626 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 C8orf44Q96CB5 159 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 ZNF285Q96NJ3 590 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 LMF1Q96S06 567 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 SELENOSQ9BQE4 189 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 CRB3Q9BUF7 120 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 RUBCNLQ9H714 662 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 LUC7LQ9NQ29 371 aaKnown RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 PLA2G3Q9NZ20 509 aa14.06□□□□□ -0.16
TRAF4-212ENST00000498540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 KLF2Q9Y5W3 355 aaPredicted RBP14.06□□□□□ -0.16
TRAF4-212ENST00000498540 TACC2O95359 2948 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 HIVEP1P15822 2718 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 FITM1A5D6W6 292 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 OR1I1O60431 355 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 KRT38O76015 456 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 SNRPB2P08579 225 aaKnown RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 ACPPP15309 386 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 CD9P21926 228 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 CTNNA2P26232 953 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 SOX11P35716 441 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 PLOD1Q02809 727 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 SRSF11Q05519 484 aaKnown RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 GRB7Q14451 532 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 DNAJC21Q5F1R6 531 aaKnown RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 TCTE1Q5JU00 501 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 C11orf63Q6NUN7 778 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 FIGLAQ6QHK4 219 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 GFRALQ6UXV0 394 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 GDF7Q7Z4P5 450 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 SLC22A15Q8IZD6 547 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 TTC29Q8NA56 475 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-212ENST00000498540 CCDC120Q96HB5 630 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 LURAP1Q96LR2 239 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 PPP1R2P1Q96PQ5 205 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 ENAMQ9NRM1 1142 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 AKAP9Q99996 3911 aa14.05□□□□□ -0.16
TRAF4-212ENST00000498540 TRGV8A0A0C4DH27 118 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 CCDC162PA2VCL2 907 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 MROH6A6NGR9 719 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 MAP2K7O14733 419 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 NRP2O60462 931 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 CTSVO60911 334 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 S1PR4O95977 384 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 F10P00742 488 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 OR56A5P0C7T3 313 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 PSMA3P25788 255 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 CCR7P32248 378 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 PTGER4P35408 488 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 TNFSF10P50591 281 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 VSX2P58304 361 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-212ENST00000498540 COPS2P61201 443 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
TRAF4-212ENST00000498540 BNC2Q6ZN30 1099 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-212ENST00000498540 ARHGEF18Q6ZSZ5 1173 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 VSTM4Q8IW00 320 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 OR2L8Q8NGY9 312 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 CFAP61Q8NHU2 1237 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 STT3BQ8TCJ2 826 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 LKAAEAR1Q8TD35 194 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 BRIX1Q8TDN6 353 aaKnown RBP14.04□□□□□ -0.16
TRAF4-212ENST00000498540 PSMF1Q92530 271 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 LRRC45Q96CN5 670 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
TRAF4-212ENST00000498540 PTGFRNQ9P2B2 879 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
TRAF4-212ENST00000498540 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 DYTNA2CJ06 578 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 USP1O94782 785 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 METTL18O95568 372 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 TPM1P09493 284 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms