RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 AKAP5P24588 427 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GRK2P25098 689 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KLRK1P26718 216 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 EIF2S3P41091 472 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 BTDP43251 543 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ATXN3P54252 364 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 RWDD2BP57060 319 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARF3P61204 181 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARF1P84077 181 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CD300CQ08708 224 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MYO1EQ12965 1108 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TBX2Q13207 712 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 TCEAL1Q15170 157 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 INPP5JQ15735 1006 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 NPY5RQ15761 445 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KYAT1Q16773 422 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MMEL1Q495T6 779 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MCMDC2Q4G0Z9 681 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FILIP1LQ4L180 1135 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF394Q53GI3 561 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DMRTC1Q5HYR2 192 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LRRC73Q5JTD7 316 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FBXO47Q5MNV8 452 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARMC4Q5T2S8 1044 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 STXBP5Q5T5C0 1151 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 INTS11Q5TA45 600 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 SEL1L2Q5TEA6 688 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPP1R2P3Q6NXS1 205 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MSANTD1Q6ZTZ1 278 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ADGRD2Q7Z7M1 963 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RALYLQ86SE5 291 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 ADGRA1Q86SQ6 560 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC22A9Q8IVM8 553 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HERC6Q8IVU3 1022 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM217AQ8IXS0 508 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ATG16L2Q8NAA4 619 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OR6K6Q8NGW6 343 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM76AQ8TAV0 307 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PIGBQ92521 554 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MAP6Q96JE9 813 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 VPS35Q96QK1 796 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TNFRSF13CQ96RJ3 184 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DDOQ99489 341 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NAT10Q9H0A0 1025 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 MRPL46Q9H2W6 279 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 TOR3AQ9H497 397 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZFP14Q9HCL3 533 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GMIPQ9P107 970 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 NKX1-2Q9UD57 310 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 BTNL2Q9UIR0 455 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KCNG1Q9UIX4 513 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRHDEQ9UKU6 1024 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 AGO1Q9UL18 857 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 RARRES3Q9UL19 164 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPT2Q9UMR5 302 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DMTF1Q9Y222 760 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CFL2Q9Y281 166 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ATP11BQ9Y2G3 1177 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MSRB2Q9Y3D2 182 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MON2Q7Z3U7 1717 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FLNCQ14315 2725 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RALGAPA2Q2PPJ7 1873 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 UBR3Q6ZT12 1888 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 A0A096LPI6 279 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRAV20A0A0B4J274 112 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 C5orf51A6NDU8 294 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZSCAN5BA6NJL1 495 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RFPL4AA6NLU0 287 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MYO1GB0I1T2 1018 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RFPL4AL1F8VTS6 287 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 AGPSO00116 658 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GPR31O00270 319 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NOL4O94818 638 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HPP00738 406 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PRB1P04280 392 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 EPHX1P07099 455 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RETP07949 1114 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ANXA3P12429 323 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TNFAIP3P21580 790 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KCNA3P22001 575 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PTPN6P29350 595 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 BTCP35070 178 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PTGDSP41222 190 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MAGEA6P43360 314 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RASSF2P50749 326 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KIF11P52732 1056 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RAC3P60763 192 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CYP4F8P98187 520 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPIDQ08752 370 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 WTAPQ15007 396 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SF3B3Q15393 1217 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CDC37Q16543 378 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 GEN1Q17RS7 908 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM83EQ2M2I3 478 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TTLL9Q3SXZ7 439 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 UGT3A2Q3SY77 523 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KIAA1755Q5JYT7 1200 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 N4BP2L1Q5TBK1 243 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 MAP3K21Q5TCX8 1036 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms