RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 NCSTNQ92542 709 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 DPYSL5Q9BPU6 564 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 RAB33BQ9H082 229 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 ATG10Q9H0Y0 220 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 OGFRQ9NZT2 677 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 PTBP2Q9UKA9 531 aaKnown RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 C2orf74A8MZ97 194 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 TM9SF1O15321 606 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 KLK8O60259 260 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 IPO13O94829 963 aaKnown RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 ZWINTO95229 277 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 CDK4P11802 303 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 RPA3P35244 121 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 GGT5P36269 586 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 ALDH18A1P54886 795 aaKnown RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 NAE1Q13564 534 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 FASTKQ14296 549 aaKnown RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 PFKFB4Q16877 469 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 NKAIN2Q5VXU1 208 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 ALYREFQ86V81 257 aaKnown RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 FAM111AQ96PZ2 611 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 ZMYND15Q9H091 742 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 CCDC177Q9NQR7 707 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-222ENST00000496567 EPHA6Q9UF33 1036 aa21.05■□□□□ 0.96
C9orf3-222ENST00000496567 GSAPA4D1B5 854 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 CPNE6O95741 557 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 ATP5F1P24539 256 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 TSTA3Q13630 321 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 RSPO4Q2I0M5 234 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 CAPN13Q6MZZ7 669 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 WDR74Q6RFH5 385 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 PLXDC1Q8IUK5 500 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 SLC22A9Q8IVM8 553 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 LRRC56Q8IYG6 542 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 C2orf73Q8N5S3 287 aaPredicted RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 PPFIBP2Q8ND30 876 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 OR56A3Q8NH54 315 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 CCDC126Q96EE4 140 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 MED8Q96G25 268 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 ZDHHC12Q96GR4 267 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 GFM1Q96RP9 751 aaKnown RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 RTKNQ9BST9 563 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 TWSG1Q9GZX9 223 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 C12orf65Q9H3J6 166 aaKnown RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 ACTR10Q9NZ32 417 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 SLC17A7Q9P2U7 560 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 TNPO3Q9Y5L0 923 aaKnown RBP21.04■□□□□ 0.96
C9orf3-222ENST00000496567 ASXL3Q9C0F0 2248 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 RP1P56715 2156 aa21.04■□□□□ 0.96
C9orf3-222ENST00000496567 A0A1W2PQM1 296 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 ISM1B1AKI9 464 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 MYL2P10916 166 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 OAS2P29728 719 aaKnown RBP21.03■□□□□ 0.96
C9orf3-222ENST00000496567 SLC18A1P54219 525 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 TBPL1P62380 186 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 SETDB1Q15047 1291 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 PTCHD3Q3KNS1 767 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 SUSD1Q6UWL2 747 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 RAB44Q7Z6P3 723 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-222ENST00000496567 TAX1BP1Q86VP1 789 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 LMNTD1Q8N9Z9 388 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 ARMC2Q8NEN0 867 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 UBTD2Q8WUN7 234 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 PHF21BQ96EK2 531 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 PCBD2Q9H0N5 130 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 SYNDIG1Q9H7V2 258 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 MED4Q9NPJ6 270 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 PCDHB11Q9Y5F2 797 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 PCNX2A6NKB5 2137 aa21.03■□□□□ 0.96
C9orf3-222ENST00000496567 STX16-NPEPL1H3BU86 382 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 NTN3O00634 580 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-222ENST00000496567 STX16O14662 325 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 TAPBPO15533 448 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 STK16O75716 305 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 CPA3P15088 417 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 NOVA1P51513 510 aaKnown RBP21.02■□□□□ 0.96
C9orf3-222ENST00000496567 NFKB2Q00653 900 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 CCDC157Q569K6 752 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 THEMIS2Q5TEJ8 643 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 IRGCQ6NXR0 463 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 METTL2BQ6P1Q9 378 aaKnown RBP21.02■□□□□ 0.96
C9orf3-222ENST00000496567 ZYG11AQ6WRX3 759 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 USP53Q70EK8 1073 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 PTGR2Q8N8N7 351 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-222ENST00000496567 SGPP1Q9BX95 441 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 CD244Q9BZW8 370 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 TOR4AQ9NXH8 423 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 SPHK1Q9NYA1 384 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 COPG2Q9UBF2 871 aa21.02■□□□□ 0.96
C9orf3-222ENST00000496567 APOBEC2Q9Y235 224 aaKnown RBP21.02■□□□□ 0.96
C9orf3-222ENST00000496567 A0A1W2PPV9 198 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 TMEM120BA0PK00 339 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 A8MT66 165 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 G3V2L1 256 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 CAPN5O15484 640 aaPredicted RBP21.02■□□□□ 0.95
C9orf3-222ENST00000496567 DLX3O60479 287 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 SLC6A12P48065 614 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 HSPA7P48741 367 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 SPIDRQ14159 915 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 ZXDCQ2QGD7 858 aaPredicted RBP21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms