RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MLIPQ5VWP3 458 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 MRNIPQ6NTE8 343 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 CENPUQ71F23 418 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 MRGPREQ86SM8 312 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 CILP2Q8IUL8 1156 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.21
VTI1A-209ENST00000496445 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 SKA2Q8WVK7 121 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-209ENST00000496445 FAM136AQ96C01 138 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 SLC39A10Q9ULF5 831 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
VTI1A-209ENST00000496445 HEATR5BQ9P2D3 2071 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 CLEC18AA5D8T8 446 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 KPNA5O15131 536 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF185O15231 689 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 CTSVO60911 334 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 SORBS2O94875 1100 aaKnown RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MATN4O95460 622 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ESR1P03372 595 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 UMODP07911 640 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MCM3P25205 808 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ATP5DP30049 168 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 GRIA3P42263 894 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 FASTKQ14296 549 aaKnown RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 NKAIN1Q4KMZ8 207 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 FIGLAQ6QHK4 219 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 CLEC18BQ6UXF7 455 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MED25Q71SY5 747 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 SDCCAG8Q86SQ7 713 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 TMEM102Q8N9M5 508 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 CLEC18CQ8NCF0 446 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 OR2Y1Q8NGV0 311 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 HMGCLL1Q8TB92 370 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 SLC22A18Q96BI1 424 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF669Q96BR6 464 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 PBKQ96KB5 322 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF285Q96NJ3 590 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 SERPINB12Q96P63 405 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 C17orf62Q9BQA9 187 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 ENAMQ9NRM1 1142 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 TXLNGQ9NUQ3 528 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 MED16Q9Y2X0 877 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 PTRH2Q9Y3E5 179 aaKnown RBP13.7□□□□□ -0.22
VTI1A-209ENST00000496445 KLK4Q9Y5K2 254 aa13.7□□□□□ -0.22
VTI1A-209ENST00000496445 USP9YO00507 2555 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ZCWPW2A0A1B0GU75 182 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 FAM237BA0A1B0GVD1 139 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ARHGEF33A8MVX0 844 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 H3BMM5 538 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 GOLGA8MH3BSY2 632 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ERGP11308 486 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 MLNP12872 115 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 COILP38432 576 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 CCNFP41002 786 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 FOLR3P41439 243 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 MAGEA3P43357 314 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 CLCN7P51798 805 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 YBX1P67809 324 aaKnown RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 SRSF1Q07955 248 aaKnown RBP eCLIP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 RAPSNQ13702 412 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 DHX34Q14147 1143 aaKnown RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 CYP2A13Q16696 494 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ANKRD20A4Q4UJ75 823 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ARMC3Q5W041 872 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF470Q6ECI4 717 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 NEPROQ6NW34 567 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 CASC4Q6P4E1 433 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 CCDC137Q6PK04 289 aaKnown RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 TTLL10Q6ZVT0 673 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 COX15Q7KZN9 410 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 PPP1R32Q7Z5V6 425 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 MCUQ8NE86 351 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 OR2L3Q8NG85 312 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 GIMAP7Q8NHV1 300 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 COG1Q8WTW3 980 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 DLG3Q92796 817 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 TCF12Q99081 682 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 SLC30A3Q99726 388 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 MIPEPQ99797 713 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 INTS7Q9NVH2 962 aaKnown RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 NDOR1Q9UHB4 597 aa13.69□□□□□ -0.22
VTI1A-209ENST00000496445 GPN3Q9UHW5 284 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-209ENST00000496445 MDC1Q14676 2089 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms