RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 GPR135Q8IZ08 494 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 ZBTB2Q8N680 514 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 C19orf47Q8N9M1 422 aaKnown RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 FDCSPQ8NFU4 85 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 N4BP2L2Q92802 583 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 ZNF669Q96BR6 464 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 DPH2Q9BQC3 489 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 TRIM56Q9BRZ2 755 aaKnown RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 TRIM31Q9BZY9 425 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 P2RY12Q9H244 342 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 PLAC1Q9HBJ0 212 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 FAM60AQ9NP50 221 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 TDRKHQ9Y2W6 561 aaKnown RBP13.88□□□□□ -0.19
CXCL12-208ENST00000496375 ZNF451Q9Y4E5 1061 aa13.88□□□□□ -0.19
CXCL12-208ENST00000496375 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 BLACEA4D250 179 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 A6NL46 340 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 EIF3HO15372 352 aaKnown RBP eCLIP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 HCRTR1O43613 425 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CHRM5P08912 532 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 HBQ1P09105 142 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 GP1BBP13224 206 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 GNLYP22749 145 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 RPS3P23396 243 aaKnown RBP eCLIP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 ACADLP28330 430 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CRYMQ14894 314 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 ZIC1Q15915 447 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 DEFB110Q30KQ9 67 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 GLE1Q53GS7 698 aaKnown RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 RNF187Q5TA31 235 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 ZNF385CQ66K41 422 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 MRNIPQ6NTE8 343 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CES3Q6UWW8 571 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 MED25Q71SY5 747 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 LRRC6Q86X45 466 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 RAB43Q86YS6 212 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 TBC1D21Q8IYX1 336 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CEP112Q8N8E3 955 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 TMEM102Q8N9M5 508 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 GALNT11Q8NCW6 608 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 TCTN2Q96GX1 697 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 OR2A14Q96R47 310 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 NUDT9Q9BW91 350 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 FAM129AQ9BZQ8 928 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 SPHK1Q9NYA1 384 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 POLG2Q9UHN1 485 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 G3BP2Q9UN86 482 aaKnown RBP13.87□□□□□ -0.19
CXCL12-208ENST00000496375 PADI2Q9Y2J8 665 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 PCDHGB7Q9Y5F8 929 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 PCSK5Q92824 1860 aa13.87□□□□□ -0.19
CXCL12-208ENST00000496375 CCDC88CQ9P219 2028 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 A0A0J9YY10 115 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SLC5A10A0PJK1 596 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 PRMT5O14744 637 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 DPM1O60762 260 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SNRNP200O75643 2136 aaKnown RBP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 OR2B3O76000 313 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 OR56A5P0C7T3 313 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 CBSLP0DN79 551 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 OTX2P32243 289 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 CBSP35520 551 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 GABRA4P48169 554 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 RRADP55042 308 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 LONRF1Q17RB8 773 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 MLIPQ5VWP3 458 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 NEPROQ6NW34 567 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 ZDHHC24Q6UX98 284 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 CILP2Q8IUL8 1156 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 IGDCC3Q8IVU1 814 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 CNTN4Q8IWV2 1026 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 OR5K2Q8NHB8 316 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 FLVCR1-AS1Q8TAF5 88 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 LPGAT1Q92604 370 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 PSMG3-AS1Q96PY0 264 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 DHRS4Q9BTZ2 278 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 SPRTNQ9H040 489 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 DPH5Q9H2P9 285 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 INTS10Q9NVR2 710 aaKnown RBP13.86□□□□□ -0.19
CXCL12-208ENST00000496375 GPR83Q9NYM4 423 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 LUZP4Q9P127 313 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 PLAGL1Q9UM63 463 aa13.86□□□□□ -0.19
CXCL12-208ENST00000496375 MAP4K5Q9Y4K4 846 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms