RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ZNF285Q96NJ3 590 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 OSBPL8Q9BZF1 889 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 SOX17Q9H6I2 414 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-209ENST00000495630 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.81■□□□□ 0.28
TMEM53-209ENST00000495630 PCDHA3Q9Y5H8 950 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 DOCK10Q96BY6 2186 aa16.81■□□□□ 0.28
TMEM53-209ENST00000495630 OTOGQ6ZRI0 2925 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 SVILO95425 2214 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 ANKRD17O75179 2603 aaKnown RBP16.8■□□□□ 0.28
TMEM53-209ENST00000495630 MROH6A6NGR9 719 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 TARM1B6A8C7 271 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 PCDH17O14917 1159 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 HPP00738 406 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 RPN2P04844 631 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 GRIA3P42263 894 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 OR1D4P47884 311 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 SHISA6Q6ZSJ9 500 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 TTC29Q8NA56 475 aaPredicted RBP16.8■□□□□ 0.28
TMEM53-209ENST00000495630 LINC01555Q8NAE3 123 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 TTC1Q99614 292 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 MENTQ9BUN1 341 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 CTSFQ9UBX1 484 aa16.8■□□□□ 0.28
TMEM53-209ENST00000495630 DYTNA2CJ06 578 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 PJA2O43164 708 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 PSMD3O43242 534 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 FKBP9O95302 570 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
TMEM53-209ENST00000495630 PTPN7P35236 360 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 ARG2P78540 354 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 POU6F1Q14863 301 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
TMEM53-209ENST00000495630 INAQ16352 499 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 ATG9BQ674R7 924 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 VSTM4Q8IW00 320 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 KBTBD2Q8IY47 623 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 SLC22A15Q8IZD6 547 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 OR2L8Q8NGY9 312 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 HAS2Q92819 552 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 SELENOSQ9BQE4 189 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 CRB3Q9BUF7 120 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 LRRC40Q9H9A6 602 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 PCM1Q15154 2024 aa16.79■□□□□ 0.28
TMEM53-209ENST00000495630 POLQO75417 2590 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 TRAV17A0A0B4J275 112 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 MACROD2A1Z1Q3 448 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 USP1O94782 785 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 TJP3O95049 919 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ACPPP15309 386 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 FDXRP22570 491 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 MCM3P25205 808 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 GRNP28799 593 aaKnown RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 CCR7P32248 378 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 FOXN2P32314 431 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 PTGER4P35408 488 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 TDGF1P3P51864 188 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 KCNK10P57789 538 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 OCA2Q04671 838 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ZXDCQ2QGD7 858 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 WASHC2DQ5SRD0 308 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 PRMT9Q6P2P2 845 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ARHGEF18Q6ZSZ5 1173 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 C2orf73Q8N5S3 287 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ASZ1Q8WWH4 475 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ITLN2Q8WWU7 325 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 NR4A3Q92570 626 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 FAM118BQ9BPY3 351 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF160Q9HCG1 818 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF304Q9HCX3 659 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 CHST11Q9NPF2 352 aa16.78■□□□□ 0.28
TMEM53-209ENST00000495630 SUCOQ9UBS9 1254 aaKnown RBP16.78■□□□□ 0.28
TMEM53-209ENST00000495630 CCDC162PA2VCL2 907 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 MAP2K7O14733 419 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 PRICKLE3O43900 615 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-209ENST00000495630 OR1I1O60431 355 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 GPC4O75487 556 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 METTL18O95568 372 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 ZGLP1P0C6A0 271 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 CETN2P41208 172 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 TNFSF10P50591 281 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 KLC1Q07866 573 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 HSPA14Q0VDF9 509 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 GRB7Q14451 532 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.77■□□□□ 0.28
TMEM53-209ENST00000495630 MTFR2Q6P444 385 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 MYO7BQ6PIF6 2116 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 UNC5DQ6UXZ4 953 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 NDUFAF7Q7L592 441 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 NLRP9Q7RTR0 991 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 DCUN1D3Q8IWE4 304 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 STT3BQ8TCJ2 826 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 PSMF1Q92530 271 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 MIEF2Q96C03 454 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 MAGEB10Q96LZ2 347 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-209ENST00000495630 TAAR6Q96RI8 345 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 TSSK1BQ9BXA7 367 aa16.77■□□□□ 0.28
TMEM53-209ENST00000495630 ZNF282Q9UDV7 671 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms