RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 KCNK10P57789 538 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ERVPABLB-1P60509 514 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 CDK3Q00526 305 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 DMWDQ09019 674 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 NR6A1Q15406 480 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 HIST2H2ACQ16777 129 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PTCHD3Q3KNS1 767 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 CACHD1Q5VU97 1274 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 LYSMD4Q5XG99 296 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 HIST2H2AA3Q6FI13 130 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PRMT9Q6P2P2 845 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 PRR23BQ6ZRT6 265 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 HEATR4Q86WZ0 1026 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 HORMAD1Q86X24 394 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 SYT12Q8IV01 421 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 KLHDC8AQ8IYD2 350 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 POU5F2Q8N7G0 328 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 FNDC5Q8NAU1 212 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 DENND6BQ8NEG7 585 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 SETD7Q8WTS6 366 aaKnown RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ESAMQ96AP7 390 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 RAD51AP1Q96B01 352 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ROPN1LQ96C74 230 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 REPS1Q96D71 796 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ZBTB18Q99592 522 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 MIPEPQ99797 713 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 TMEM79Q9BSE2 394 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 TEX101Q9BY14 249 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ZMYND15Q9H091 742 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 DCLRE1BQ9H816 532 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 NMRK1Q9NWW6 199 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 NOP53Q9NZM5 478 aaKnown RBP9.98□□□□□ -0.81
HDAC3-214ENST00000495485 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 TIMM22Q9Y584 194 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 KCNE2Q9Y6J6 123 aa9.98□□□□□ -0.81
HDAC3-214ENST00000495485 ATP6AP2A0A1C7CYW4 349 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 MEI4A8MW99 385 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 AIM2O14862 343 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ANGPT2O15123 496 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 LATO43561 262 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 PEX11AO75192 247 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ATP6AP2O75787 350 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 NPPAP01160 153 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 JUNP05412 331 aaKnown RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 HOXC4P09017 264 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZNF8P17098 575 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 GNAZP19086 355 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 CD27P26842 260 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 HALP42357 657 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 GNPDA1P46926 289 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 SLC6A12P48065 614 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TAS2R38P59533 333 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 PHEXP78562 749 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 EMX2Q04743 252 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TBL3Q12788 808 aaKnown RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TRAF3Q13114 568 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 LAPTM5Q13571 262 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 WSCD2Q2TBF2 565 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 KHDC1Q4VXA5 237 aaKnown RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 PDCD4Q53EL6 469 aaKnown RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 FBXO48Q5FWF7 155 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 XKR7Q5GH72 579 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZNF648Q5T619 568 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 FBXW10Q5XX13 1052 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TMEM198Q66K66 360 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 KIAA0895LQ68EN5 471 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 CAPN13Q6MZZ7 669 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 LETMD1Q6P1Q0 360 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 AGTRAPQ6RW13 159 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 HACD2Q6Y1H2 254 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 IQCHQ86VS3 1027 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 MYLK4Q86YV6 388 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 RASGRP3Q8IV61 690 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 VRK3Q8IV63 474 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 DEFB107AQ8IZN7 70 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 PGAM4Q8N0Y7 254 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 L3MBTL4Q8NA19 623 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 FAM13CQ8NE31 585 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 OR52B6Q8NGF0 335 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 OR9A1PQ8NGU1 263 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 JADE3Q92613 823 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 DLG3Q92796 817 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 METTL2AQ96IZ6 378 aaKnown RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 GPR174Q9BXC1 333 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZDHHC5Q9C0B5 715 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TNFRSF12AQ9NP84 129 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZIM2Q9NZV7 527 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 CCDC167Q9P0B6 97 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 KLQ9UEF7 1012 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 MBD1Q9UIS9 605 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZNF490Q9ULM2 529 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 BTRCQ9Y297 605 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-214ENST00000495485 TMED5Q9Y3A6 229 aa9.97□□□□□ -0.81
HDAC3-214ENST00000495485 R4GN57 208 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms