RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CYSRT1A8MQ03 144 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 C9J4A7 227 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 KPNA5O15131 536 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 CNOT3O75175 753 aaKnown RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 KLF7O75840 302 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 RPS3P23396 243 aaKnown RBP eCLIP9.22□□□□□ -0.93
MSH5-218ENST00000494646 MCM3P25205 808 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 PSMB5P28074 263 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 COILP38432 576 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 PGDP52209 483 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 CDK16Q00536 496 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 DHX34Q14147 1143 aaKnown RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 FASTKQ14296 549 aaKnown RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 SSPNQ14714 243 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 NADK2Q4G0N4 442 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 ACSBG2Q5FVE4 666 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 MRNIPQ6NTE8 343 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 TLDC1Q6P9B6 456 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 CCDC137Q6PK04 289 aaKnown RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 LRRC6Q86X45 466 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 LPGAT1Q92604 370 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 SLC22A18Q96BI1 424 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 FOPNLQ96NB1 174 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 GBP5Q96PP8 586 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 MIPEPQ99797 713 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 DPH2Q9BQC3 489 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 NUDT9Q9BW91 350 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 CHRNA10Q9GZZ6 450 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 LUZP4Q9P127 313 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 STOX2Q9P2F5 926 aaPredicted RBP9.22□□□□□ -0.93
MSH5-218ENST00000494646 JRKLQ9Y4A0 524 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 SCN3AQ9NY46 2000 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 CTAGE9A4FU28 777 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 SDR42E2A6NKP2 422 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 PFDN6O15212 129 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 PRICKLE3O43900 615 aaPredicted RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 S1PR4O95977 384 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 PKMP14618 531 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 FOLR3P41439 243 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 OR1D4P47884 311 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 CTBP1Q13363 440 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 TSTA3Q13630 321 aaPredicted RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 THOC5Q13769 683 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 KLHL38Q2WGJ6 581 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 NKAIN1Q4KMZ8 207 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ANKRD20A4Q4UJ75 823 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 NEPROQ6NW34 567 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 CENPUQ71F23 418 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 MED25Q71SY5 747 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 RAB43Q86YS6 212 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 REXO1L1PQ8IX06 675 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 SLC35F6Q8N357 371 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 RASGEF1CQ8N431 466 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 RAB42Q8N4Z0 105 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 DTWD1Q8N5C7 304 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 METTL27Q8N6F8 245 aaPredicted RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 DENND1AQ8TEH3 1009 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 COG1Q8WTW3 980 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ZUFSPQ96AP4 578 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ZNF669Q96BR6 464 aaPredicted RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 TCF12Q99081 682 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 SLC30A3Q99726 388 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ACAT2Q9BWD1 397 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 FBXO6Q9NRD1 293 aaPredicted RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 SLC22A11Q9NSA0 550 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ABCF3Q9NUQ8 709 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 INTS7Q9NVH2 962 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 TRMT1Q9NXH9 659 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 SAMD15Q9P1V8 674 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 PADI2Q9Y2J8 665 aa9.21□□□□□ -0.94
MSH5-218ENST00000494646 PCDHGA9Q9Y5G4 932 aaKnown RBP9.21□□□□□ -0.94
MSH5-218ENST00000494646 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 A0A0J9YVX5 310 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 A0A1W2PPV9 198 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MAGEB16A2A368 324 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 E5RI56 91 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 PEX12O00623 359 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 NRP2O60462 931 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 CTSVO60911 334 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 ESR1P03372 595 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 EIF2S1P05198 315 aaKnown RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 PAMP19021 973 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 ARSFP54793 590 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 RRADP55042 308 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 VSX2P58304 361 aaPredicted RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 CUL1Q13616 776 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 UBAP2LQ14157 1087 aaKnown RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 TYSND1Q2T9J0 566 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 ZC3H12BQ5HYM0 836 aaKnown RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 WASHC2DQ5SRD0 308 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 KIAA0930Q6ICG6 404 aaPredicted RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 FRMPD2BQ6IN97 320 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 SUSD1Q6UWL2 747 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 SHISA6Q6ZSJ9 500 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms