RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 KCNMB2Q9Y691 235 aa6.97□□□□□ -1.29
RBM39-239ENST00000494274 AP1M2Q9Y6Q5 423 aa6.97□□□□□ -1.29
RBM39-239ENST00000494274 A0A0J9YVX5 310 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ARGFXA6NJG6 315 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ARHGEF33A8MVX0 844 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 EFCAB8A8MWE9 144 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 C9J4A7 227 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CCDC188H7C350 402 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 PYCARD-AS1I3L0S3 204 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ZSCAN9O15535 394 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 ZBTB14O43829 449 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 VPS26AO75436 327 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 MATN4O95460 622 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 TTC4O95801 387 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 AHSGP02765 367 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CATP04040 527 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 EIF2S1P05198 315 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 MSL3P1P0C860 447 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 MCM3P25205 808 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 PSMB5P28074 263 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CASQ1P31415 396 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 RPA3P35244 121 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 RORAP35398 523 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ELK3P41970 407 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 GABRA4P48169 554 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CCL11P51671 97 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CLCN7P51798 805 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ITGA8P53708 1063 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 YBX1P67809 324 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 DCDP81605 110 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 CRYMQ14894 314 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ZC3H12BQ5HYM0 836 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 SPANXN3Q5MJ09 141 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 FCRL6Q6DN72 434 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 SUSD1Q6UWL2 747 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CYHR1Q6ZMK1 362 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 SYVN1Q86TM6 617 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ANKMY2Q8IV38 441 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CPNE9Q8IYJ1 553 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 GABPB2Q8TAK5 448 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 C9orf43Q8TAL5 461 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 DENND1AQ8TEH3 1009 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 SMPDL3AQ92484 453 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 KCNJ9Q92806 393 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ZUFSPQ96AP4 578 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 LRFN5Q96NI6 719 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 RUNDC3BQ96NL0 473 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 PKP4Q99569 1192 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 NDNQ99608 321 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 NAT9Q9BTE0 207 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 AARSD1Q9BTE6 412 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 RAB11FIP5Q9BXF6 653 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 NLNQ9BYT8 704 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ADNPQ9H2P0 1102 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 FAM114A2Q9NRY5 505 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 STARD5Q9NSY2 213 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 IFT80Q9P2H3 777 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 RNF14Q9UBS8 474 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 GPN3Q9UHW5 284 aaPredicted RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 TRMT6Q9UJA5 497 aaKnown RBP6.96□□□□□ -1.3
RBM39-239ENST00000494274 TCFL5Q9UL49 500 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 CHMP2BQ9UQN3 213 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 MAN2B2Q9Y2E5 1009 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 MED16Q9Y2X0 877 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 SNX24Q9Y343 169 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 DHRS7Q9Y394 339 aa6.96□□□□□ -1.3
RBM39-239ENST00000494274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
RBM39-239ENST00000494274 NBEAQ8NFP9 2946 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 A0A1W2PPV9 198 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 MKRN2OSH3BPM6 223 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 J3QKU1 62 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 SMAPO00193 183 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 FANCGO15287 622 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 PSIP1O75475 530 aaKnown RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 DNAJB5O75953 348 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 SEC31AO94979 1220 aaKnown RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 RECKO95980 971 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 CAPN1P07384 714 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 RAB40ALP0C0E4 278 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 ENO3P13929 434 aaPredicted RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 PLA2G2AP14555 144 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 SAT1P21673 171 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 GABRB3P28472 473 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 ATP5DP30049 168 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 CMPK1P30085 196 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 DEKP35659 375 aaKnown RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 ARL4CP56559 192 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 VSX2P58304 361 aaPredicted RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
RBM39-239ENST00000494274 CHAF1BQ13112 559 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 IL10RAQ13651 578 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 GBX1Q14549 363 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 MORF4L2Q15014 288 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 HIF1AQ16665 826 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 CYP2A13Q16696 494 aa6.95□□□□□ -1.3
RBM39-239ENST00000494274 UGT8Q16880 541 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms