RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.21□□□□□ -0.61
RFC4-214ENST00000494047 RAVER1Q8IY67 606 aaKnown RBP11.21□□□□□ -0.61
RFC4-214ENST00000494047 OFCC1Q8IZS5 231 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 CFAP52Q8N1V2 620 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 NXPE1Q8N323 547 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 LIX1Q8N485 282 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 PAF1Q8N7H5 531 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 SLC22A17Q8WUG5 538 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 PLEKHA8Q96JA3 519 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 CASD1Q96PB1 797 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 LMAN2LQ9H0V9 348 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 CERS4Q9HA82 394 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 FANCEQ9HB96 536 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 PPIL1Q9Y3C6 166 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 PCDHGC4Q9Y5F7 938 aa11.21□□□□□ -0.61
RFC4-214ENST00000494047 C1orf232A0A0U1RR37 186 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 A8MVJ9 347 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CLDN25C9JDP6 229 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 BCKDKO14874 412 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 NUAK1O60285 661 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 OR1I1O60431 355 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 B4GALT3O60512 393 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 EPN2O95208 641 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 SLC25A14O95258 325 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 ATE1O95260 518 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 GALTP07902 379 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 INHBBP09529 407 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 ARSAP15289 507 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 PORP16435 677 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 UGT1A6P19224 532 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 FPR1P21462 350 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 IGFBP5P24593 272 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 DNAJA1P31689 397 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 HSPA7P48741 367 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 ALDH7A1P49419 539 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 ENTPD1P49961 510 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 ST13P50502 369 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 PSMD7P51665 324 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 POLR2LP62875 67 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 TUBA1BP68363 451 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 ECT2LQ008S8 904 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 TBC1D25Q3MII6 688 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 RFTN2Q52LD8 501 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 LIPJQ5W064 366 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CAPN13Q6MZZ7 669 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 KIAA1841Q6NSI8 718 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 NEK5Q6P3R8 708 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 TUBA1AQ71U36 451 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 PIWIL3Q7Z3Z3 882 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 R3HCC1LQ7Z5L2 792 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 ZC3H7AQ8IWR0 971 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 SPARTQ8N0X7 666 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CPA6Q8N4T0 437 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CHDHQ8NE62 594 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 OR10A6Q8NH74 314 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 ZNF461Q8TAF7 563 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 PIH1D2Q8WWB5 315 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 RORBQ92753 470 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 FCRL1Q96LA6 429 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 COPS8Q99627 209 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CPPED1Q9BRF8 314 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 SLC12A9Q9BXP2 914 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 PAIP1Q9H074 479 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 NSUN3Q9H649 340 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 ATAD3AQ9NVI7 634 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 VAPAQ9P0L0 249 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 KIAA1522Q9P206 1035 aaPredicted RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 KLQ9UEF7 1012 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 WARS2Q9UGM6 360 aaKnown RBP11.2□□□□□ -0.62
RFC4-214ENST00000494047 IKZF3Q9UKT9 509 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 SLC27A5Q9Y2P5 690 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 CHD7Q9P2D1 2997 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 PLXNA4Q9HCM2 1894 aa11.2□□□□□ -0.62
RFC4-214ENST00000494047 IGLV3-16A0A075B6K0 115 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 A0A1B0GTL3 188 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SOBPA7XYQ1 873 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 ZNF99A8MXY4 864 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 F8W810 466 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SLC1A7O00341 560 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 JRKO75564 520 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 GABARAPO95166 117 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 CNPP09543 421 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 OCM2P0CE71 109 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 ZNF30P17039 623 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 NELFEP18615 380 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 DCTP40126 519 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 KIR3DL1P43629 444 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 HTR6P50406 440 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 EPHB3P54753 998 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 PCDH1Q08174 1060 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms