RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MFSD13AQ14CX5 517 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CHST9Q7L1S5 443 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CPNE8Q86YQ8 564 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 GALNT4Q8N4A0 578 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 DTWD2Q8NBA8 298 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 TBC1D15Q8TC07 691 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PDCD6IPQ8WUM4 868 aaKnown RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SLC13A3Q8WWT9 602 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PTP4A1Q93096 173 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FBXW5Q969U6 566 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 MAGED4Q96JG8 741 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZYG11BQ9C0D3 744 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CPNE5Q9HCH3 593 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 GPAMQ9HCL2 828 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 TAS2R1Q9NYW7 299 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PKD2L2Q9NZM6 624 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZIM2Q9NZV7 527 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 A0A1W2PPW3 197 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 TSPAN4O14817 238 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 DENRO43583 198 aaKnown RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A9O60656 530 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SMPD2O60906 423 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CLDN11O75508 207 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 KRT36O76013 467 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 PROSCO94903 275 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CCNB2O95067 398 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 PDGFAP04085 211 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 RHOCP08134 193 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A6P19224 532 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A1P22309 533 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A4P22310 534 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 IL1R2P27930 398 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A3P35503 534 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A5P35504 534 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CSKP41240 450 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 WASP42768 502 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 RAB13P51153 203 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CASP9P55211 416 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CDH4P55283 916 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 COPZ1P61923 177 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 STX5Q13190 355 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CA9Q16790 459 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SLC45A4Q5BKX6 768 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 C1orf185Q5T7R7 199 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UBE2UQ5VVX9 321 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 DENND6AQ8IWF6 608 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SRRM1Q8IYB3 904 aaKnown RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 CLIP4Q8N3C7 705 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SYNPOQ8N3V7 929 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 FAM71DQ8N9W8 422 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 OR9A1PQ8NGU1 263 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 FIBINQ8TAL6 211 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SORCS1Q8WY21 1168 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SLC22A4Q9H015 551 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A7Q9HAW7 530 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A10Q9HAW8 530 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 UGT1A8Q9HAW9 530 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SLC6A14Q9UN76 642 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
BRCA1-222ENST00000493919 TESMINQ9Y4I5 508 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 SLC22A7Q9Y694 548 aa11.32□□□□□ -0.6
BRCA1-222ENST00000493919 LAMTOR5O43504 91 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 KRT37O76014 449 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 MOCS3O95396 460 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF23P17027 643 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 ATP5F1P24539 256 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 EPHB2P29323 1055 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 NR4A2P43354 598 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 TPI1P60174 286 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 MAGOHP61326 146 aaKnown RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF33AQ06730 810 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 ALG11Q2TAA5 492 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 TOR2AQ5JU69 321 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 CXorf57Q6NSI4 855 aaKnown RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 CEP76Q8TAP6 659 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 WFIKKN2Q8TEU8 576 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 MAGOHBQ96A72 148 aaKnown RBP11.31□□□□□ -0.6
BRCA1-222ENST00000493919 ACDQ96AP0 544 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 SLC25A36Q96CQ1 311 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 PCDHB16Q9NRJ7 776 aa11.31□□□□□ -0.6
BRCA1-222ENST00000493919 RIC8BQ9NVN3 520 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms