RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RUVBL1Q9Y265 456 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SNX10Q9Y5X0 201 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 HHLA1C9JL84 531 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 RNASEH2AO75792 299 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 HLA-DPB1P04440 258 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 C2P06681 752 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF35P13682 527 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 PEX2P28328 305 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 CCNFP41002 786 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 MVKQ03426 396 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 INTS6LQ5JSJ4 861 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 CLEC6AQ6EIG7 209 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 PAOXQ6QHF9 649 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ABHD13Q7L211 337 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SLC22A16Q86VW1 577 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF280BQ86YH2 543 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ARL14Q8N4G2 192 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 LINC00471Q8N535 108 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SLC44A1Q8WWI5 657 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TMEM41AQ96HV5 264 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 DCSTAMPQ9H295 470 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SEC61A2Q9H9S3 476 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TAS2R1Q9NYW7 299 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SLC27A5Q9Y2P5 690 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 RAI2Q9Y5P3 530 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 A2ML1A8K2U0 1454 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 PIGBOS1A0A0B4J2F0 54 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 RBM47A0AV96 593 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 LRRN3E7EW58 273 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 RGL2O15211 777 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TLR5O60602 858 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 RAD51DO75771 328 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 HTR1AP08908 422 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 HOXB9P17482 250 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 RPS3P23396 243 aaKnown RBP eCLIP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SMSP52788 366 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SELENOVP59797 346 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 NFKB2Q00653 900 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SLC3A1Q07837 685 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CD47Q08722 323 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ENPP2Q13822 863 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 MLC1Q15049 377 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 DPY19L1Q2PZI1 675 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 UBXN11Q5T124 520 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 DCLRE1AQ6PJP8 1040 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ANKRD46Q86W74 232 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ARHGAP12Q8IWW6 846 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 MFSD2AQ8NA29 543 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 LRRN4CLQ8ND94 238 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 OR14A2Q96R54 314 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 WACQ9BTA9 647 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 PORCNQ9H237 461 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 LRRN3Q9H3W5 708 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 COQ10BQ9H8M1 238 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF358Q9NW07 568 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TAS2R14Q9NYV8 317 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SPATA31A3Q5VYP0 1347 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 OR6C75A6NL08 312 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 IQCF5A8MTL0 148 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 AIPO00170 330 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 PAGE1O75459 146 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SFTPBP07988 381 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CDH1P12830 882 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 IFNGR1P15260 489 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ADORA2AP29274 412 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 MPIP34949 423 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 GRIA2P42262 883 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CTSOP43234 321 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 AQP4P55087 323 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SLC26A5P58743 744 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ANKDD1AQ495B1 522 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CLEC12AQ5QGZ9 265 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF773Q6PK81 442 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CHST9Q7L1S5 443 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ANKS1BQ7Z6G8 1248 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 OR7G2Q8NG99 324 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SLC13A3Q8WWT9 602 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 P2RY11Q96G91 374 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 FCRL2Q96LA5 508 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TUBA1CQ9BQE3 449 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ORAI3Q9BRQ5 295 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 DUSP26Q9BV47 211 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ASPNQ9BXN1 380 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 UNKLQ9H9P5 680 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 MRPS30Q9NP92 439 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 CD320Q9NPF0 282 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TUBG2Q9NRH3 451 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 PNO1Q9NRX1 252 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 GNG8Q9UK08 70 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF175Q9Y473 711 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 HSPB11Q9Y547 144 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 AGPSO00116 658 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 POLR1CO15160 346 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 SLC22A2O15244 555 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 LGALS2P05162 132 aa7.7□□□□□ -1.18
BRCA1-221ENST00000493795 ATXN7L3Q14CW9 347 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 TSTQ16762 297 aaKnown RBP7.7□□□□□ -1.18
BRCA1-221ENST00000493795 PDE12Q6L8Q7 609 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms