RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DSC3Q14574 896 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SYVN1Q86TM6 617 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 FRMD6Q96NE9 622 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 ZFP3Q96NJ6 502 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SLC32A1Q9H598 525 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SLC28A3Q9HAS3 691 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 ABI3Q9P2A4 366 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 RBMX2Q9Y388 322 aaKnown RBP19.69■□□□□ 0.74
RNF40-203ENST00000493683 CCL22O00626 93 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 PRH1P02810 166 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 TIFABQ6ZNK6 161 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 ZNF615Q8N8J6 731 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 PCDHGB5Q9Y5G0 923 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 PCDHGB2Q9Y5G2 931 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 CPQQ9Y646 472 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 OR1I1O60431 355 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 MYCLP1P12525 358 aaPredicted RBP19.69■□□□□ 0.74
RNF40-203ENST00000493683 SMSP52788 366 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 SLC10A6Q3KNW5 377 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 ATAT1Q5SQI0 421 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 CYP2S1Q96SQ9 504 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 KXD1Q9BQD3 176 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 WRAP53Q9BUR4 548 aaKnown RBP19.69■□□□□ 0.74
RNF40-203ENST00000493683 SNX10Q9Y5X0 201 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 A8MT66 165 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 ZNF208O43345 1280 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 FMO3P31513 532 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 DGKGP49619 791 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 NCBP2P52298 156 aaKnown RBP eCLIP19.68■□□□□ 0.74
RNF40-203ENST00000493683 PYHIN1Q6K0P9 492 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 KAT2AQ92830 837 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 CLIC1O00299 241 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 TBX10O75333 385 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 RCBTB2O95199 551 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 KAT7O95251 611 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 CARD16Q5EG05 197 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 KLHDC10Q6PID8 442 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 SMARCD3Q6STE5 483 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 AMZ2Q86W34 360 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 INO80EQ8NBZ0 244 aaPredicted RBP19.68■□□□□ 0.74
RNF40-203ENST00000493683 FBXO22Q8NEZ5 403 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 DCSTAMPQ9H295 470 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 MARCH7Q9H992 704 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 HCN3Q9P1Z3 774 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 NR2E1Q9Y466 385 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 NR2C1P13056 603 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 RYKP34925 604 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 BLKP51451 505 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 APLP1P51693 650 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 CSTF1Q05048 431 aaKnown RBP19.68■□□□□ 0.74
RNF40-203ENST00000493683 DUOXA1Q1HG43 343 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 TPGS2Q68CL5 300 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 FBXO9Q9UK97 447 aaPredicted RBP19.68■□□□□ 0.74
RNF40-203ENST00000493683 H0YJX3 145 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 CCL16O15467 120 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 DBIP07108 87 aaKnown RBP19.68■□□□□ 0.74
RNF40-203ENST00000493683 HOXC12P31275 282 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 KCNJ11Q14654 390 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 RGMAQ96B86 450 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 AURKBQ96GD4 344 aaPredicted RBP19.68■□□□□ 0.74
RNF40-203ENST00000493683 SPATA9Q9BWV2 254 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 AKTIPQ9H8T0 292 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 MLXQ9UH92 298 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 OAZ3Q9UMX2 235 aa19.68■□□□□ 0.74
RNF40-203ENST00000493683 MYBPHLA2RUH7 354 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 H1F0P07305 194 aaKnown RBP19.67■□□□□ 0.74
RNF40-203ENST00000493683 FPR1P21462 350 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 PITRM1Q5JRX3 1037 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 SMYD5Q6GMV2 418 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 FAM129CQ86XR2 697 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 OR8H3Q8N146 312 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 ARMC10Q8N2F6 343 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 ZNF527Q8NB42 609 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 ELOVL2Q9NXB9 296 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 FZD4Q9ULV1 537 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 OR2AT4A6NND4 320 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 YJEFN3A6XGL0 299 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 ATP4BP51164 291 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 CARTPTQ16568 116 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 SMU1Q2TAY7 513 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 MINDY4Q4G0A6 757 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 NADK2Q4G0N4 442 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 DNM1P34Q6PK57 102 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 GPR151Q8TDV0 419 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 AIFM2Q9BRQ8 373 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 DPAGT1Q9H3H5 408 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 LYARQ9NX58 379 aaKnown RBP19.67■□□□□ 0.74
RNF40-203ENST00000493683 PCDHAC2Q9Y5I4 1007 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 HLA-DPB1P04440 258 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 MSANTD1Q6ZTZ1 278 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 TOMM5Q8N4H5 51 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 PNLDC1Q8NA58 520 aaKnown RBP19.67■□□□□ 0.74
RNF40-203ENST00000493683 RDH12Q96NR8 316 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 SLC35A5Q9BS91 424 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 PCDHAC1Q9H158 963 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 EBF2Q9HAK2 575 aa19.67■□□□□ 0.74
RNF40-203ENST00000493683 ZCCHC3Q9NUD5 404 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms