RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 TGM1P22735 817 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 KRT20P35900 424 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 GBX1Q14549 363 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 ZNF551Q7Z340 670 aaPredicted RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 PROSER1Q86XN7 944 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 PTRH1Q86Y79 214 aaKnown RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 ADGRG2Q8IZP9 1017 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 TTC29Q8NA56 475 aaPredicted RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 COQ7Q99807 217 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 UGT2B28Q9BY64 529 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 GPN2Q9H9Y4 310 aaPredicted RBP13.48□□□□□ -0.25
TFE3-204ENST00000493583 OGDHLQ9ULD0 1010 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 PRSS21Q9Y6M0 314 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 CCDC88CQ9P219 2028 aa13.48□□□□□ -0.25
TFE3-204ENST00000493583 TMEM88BA6NKF7 163 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CTDSP2O14595 271 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 TSPAN12O95859 305 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 WEE1P30291 646 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 AKT1P31749 480 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 AIF1P55008 147 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 UBE3AQ05086 875 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 DUSP4Q13115 394 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CLPPQ16740 277 aaPredicted RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 ADNP2Q6IQ32 1131 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CLECL1Q8IZS7 167 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ZBTB18Q99592 522 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 AASDHPPTQ9NRN7 309 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 GPR83Q9NYM4 423 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 FCF1Q9Y324 198 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 CYP11A1P05108 521 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 FHP07954 510 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ST13P50502 369 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 ATP4BP51164 291 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 PWP1Q13610 501 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 BCL2A1Q16548 175 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 MANEALQ5VSG8 457 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 HMGN2P46Q86SG4 172 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 THEM5Q8N1Q8 247 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 RBM4BQ9BQ04 359 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 RBM4Q9BWF3 364 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 CRISPLD1Q9H336 500 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 RAD18Q9NS91 495 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ZFP37Q9Y6Q3 630 aaPredicted RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 TRIM64A6NGJ6 449 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 ZSCAN5BA6NJL1 495 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 H0YAE9 185 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 LRRTM2O43300 516 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 SMARCB1Q12824 385 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 SPOUT1Q5T280 376 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 LRRC66Q68CR7 880 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 SPATA19Q7Z5L4 167 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 AKAP14Q86UN6 197 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 HORMAD1Q86X24 394 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 PTCD2Q8WV60 388 aaKnown RBP13.47□□□□□ -0.25
TFE3-204ENST00000493583 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 NEDD4LQ96PU5 975 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
TFE3-204ENST00000493583 FAM227AF5H4B4 570 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 H3BM21 787 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 INSIG1O15503 277 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 AIREO43918 545 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 PCDHGA12O60330 932 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 APOL3O95236 402 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 DDX5P17844 614 aaKnown RBP13.46□□□□□ -0.25
TFE3-204ENST00000493583 GALNT1Q10472 559 aaPredicted RBP13.46□□□□□ -0.25
TFE3-204ENST00000493583 ARTNQ5T4W7 220 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 NXNL2Q5VZ03 156 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 BEND5Q7L4P6 421 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 SLC44A2Q8IWA5 706 aaPredicted RBP13.46□□□□□ -0.25
TFE3-204ENST00000493583 VANGL1Q8TAA9 524 aaPredicted RBP13.46□□□□□ -0.25
TFE3-204ENST00000493583 TMEM184CQ9NVA4 438 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 TTC34A8MYJ7 566 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 FFAR2O15552 330 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 ULK1O75385 1050 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 CCNKO75909 580 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 WISP3O95389 354 aaPredicted RBP13.46□□□□□ -0.25
TFE3-204ENST00000493583 CSF2P04141 144 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 STSP08842 583 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 UMPSP11172 480 aa13.46□□□□□ -0.25
TFE3-204ENST00000493583 SERPINB10P48595 397 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms