RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SLC26A1Q9H2B4 701 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 FAM60AQ9NP50 221 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 CHRAC1Q9NRG0 131 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 SPHK1Q9NYA1 384 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 SPATA7Q9P0W8 599 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 PLEKHB1Q9UF11 243 aaPredicted RBP8.42□□□□□ -1.06
NUP50-217ENST00000491860 SLC2A6Q9UGQ3 507 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 MAP4K5Q9Y4K4 846 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 KLK4Q9Y5K2 254 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 PCM1Q15154 2024 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 FER1L5A0AVI2 2057 aa8.42□□□□□ -1.06
NUP50-217ENST00000491860 NUP210LQ5VU65 1888 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 MAGEB16A2A368 324 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 PCDH17O14917 1159 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 DSCR3O14972 297 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 PRPF4O43172 522 aaKnown RBP eCLIP8.41□□□□□ -1.06
NUP50-217ENST00000491860 AGFG2O95081 481 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 DDAH2O95865 285 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 MAGP20916 626 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 ALAS2P22557 587 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 MMP11P24347 488 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 RPL22P35268 128 aaKnown RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 SESN2P58004 480 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 INPP5JQ15735 1006 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 ZIC1Q15915 447 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 NKAIN1Q4KMZ8 207 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 DCAF10Q5QP82 559 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 PRMT9Q6P2P2 845 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 FIGLAQ6QHK4 219 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 IGFL3Q6UXB1 125 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 TRIM73Q86UV7 250 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 MCATQ8IVS2 390 aaKnown RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 LMNTD2Q8IXW0 634 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 ZADH2Q8N4Q0 377 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 TAB3Q8N5C8 712 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 OTUD6BQ8N6M0 293 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 ZNF655Q8N720 491 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 LMNTD1Q8N9Z9 388 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 CFAP61Q8NHU2 1237 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 SKA2Q8WVK7 121 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 NAP1L3Q99457 506 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 SELENOSQ9BQE4 189 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 KIFC1Q9BW19 673 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 NUDT9Q9BW91 350 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 SPRTNQ9H040 489 aaPredicted RBP8.41□□□□□ -1.06
NUP50-217ENST00000491860 P2RY12Q9H244 342 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 FAM114A2Q9NRY5 505 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 SEMA3GQ9NS98 782 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 TREX1Q9NSU2 369 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 P4HTMQ9NXG6 502 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 CDYLQ9Y232 598 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 B3GNT3Q9Y2A9 372 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 ITPR2Q14571 2701 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 ICE1Q9Y2F5 2266 aa8.41□□□□□ -1.06
NUP50-217ENST00000491860 FITM1A5D6W6 292 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 A6NL46 340 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 AGPSO00116 658 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 TXNDC9O14530 226 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 VPS26AO75436 327 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 CCNDBP1O95273 360 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 FGGP02679 453 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 TPBGLP0DKB5 382 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 PKMP14618 531 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 CMPK1P30085 196 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 PEBP1P30086 187 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 GRIA1P42261 906 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 GCGRP47871 477 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 CARSP49589 748 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 EMP3P54852 163 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 CSE1LP55060 971 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 AP2B1P63010 937 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 ARHGAP19Q14CB8 494 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 TYSND1Q2T9J0 566 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 DEFB110Q30KQ9 67 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 NADK2Q4G0N4 442 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 ANKRD20A4Q4UJ75 823 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 C1orf189Q5VU69 101 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 SLC6A19Q695T7 634 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 KIAA0930Q6ICG6 404 aaPredicted RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 TTLL10Q6ZVT0 673 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 NEK10Q6ZWH5 1172 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 OVCH1Q7RTY7 1134 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 LINC01555Q8NAE3 123 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 MVB12AQ96EY5 273 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 ZNF778Q96MU6 729 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 ZNF285Q96NJ3 590 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 MENTQ9BUN1 341 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 ILKAPQ9H0C8 392 aaPredicted RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 XAB2Q9HCS7 855 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 CUTCQ9NTM9 273 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 INTS10Q9NVR2 710 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 KLHL42Q9P2K6 505 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 DHCR7Q9UBM7 475 aaKnown RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 TTC7AQ9ULT0 858 aaPredicted RBP8.4□□□□□ -1.06
NUP50-217ENST00000491860 PLAGL1Q9UM63 463 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms