RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 CHST8Q9H2A9 424 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 ZNF71Q9NQZ8 489 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 KCND3Q9UK17 655 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 ZCWPW2A0A1B0GU75 182 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 PIPSLA2A3N6 862 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 CDC14CA4D256 554 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 TMEM150CB9EJG8 249 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 GOLGA8KD6RF30 607 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 GOLGA8TH3BQL2 631 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 MEN1O00255 615 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 NDUFS3O75489 264 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 SLCO2B1O94956 709 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 RECKO95980 971 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 AOAHP28039 575 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 PTPN4P29074 926 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 ECHS1P30084 290 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 SHMT2P34897 504 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 VSNL1P62760 191 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 HSPA14Q0VDF9 509 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 SYTL3Q4VX76 610 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 ZNF385CQ66K41 422 aaPredicted RBP12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 NEPROQ6NW34 567 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 WDR93Q6P2C0 686 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 KCNMB4Q86W47 210 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 DSELQ8IZU8 1212 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 CERS2Q96G23 380 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM167BQ9BTA0 163 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 GPR87Q9BY21 358 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 PARD6BQ9BYG5 372 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 PCMTD2Q9NV79 361 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 IL1RAPL1Q9NZN1 696 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 CIDEBQ9UHD4 219 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 MED13Q9UHV7 2174 aa12.25□□□□□ -0.45
SEC61A1-206ENST00000491668 KRT87PA6NCN2 255 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 PRMT5O14744 637 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 DNAJB5O75953 348 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 GSTA2P09210 222 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 ERVK-10P10266 1014 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 NR1D1P20393 614 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 PKLRP30613 574 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 SSTR1P30872 391 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 TTPAP49638 278 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 PTPN13Q12923 2485 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 CBLBQ13191 982 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 KYNUQ16719 465 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 UGT8Q16880 541 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 CTSL3PQ5NE16 218 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 STEAP4Q687X5 459 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 ZNF470Q6ECI4 717 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM198BQ6UWH4 519 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 C9orf43Q8TAL5 461 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 ADAMTS17Q8TE56 1095 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 ASZ1Q8WWH4 475 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 CDKL2Q92772 493 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 MR1Q95460 341 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 BIRC8Q96P09 236 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 WDR83Q9BRX9 315 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 TRIM55Q9BYV6 548 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 IARS2Q9NSE4 1012 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 OR6C2Q9NZP2 312 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 ZFATQ9P243 1243 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 POLG2Q9UHN1 485 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 POLHQ9Y253 713 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 VPS9D1Q9Y2B5 631 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 KLHL20Q9Y2M5 609 aa12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 HEMK1Q9Y5R4 338 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-206ENST00000491668 USP9XQ93008 2570 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 F8W8V4 182 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 WISP1O95388 367 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 ACSL3O95573 720 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 PDGFAP04085 211 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM153BP0C7A2 387 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 MYBL2P10244 700 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 RPS3P23396 243 aaKnown RBP eCLIP12.23□□□□□ -0.457e-11■□□□□ 10.2
SEC61A1-206ENST00000491668 STX2P32856 288 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 PMS2P54278 862 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 PLOD1Q02809 727 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 MGAT5Q09328 741 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 NAA30Q147X3 362 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 DEFB110Q30KQ9 67 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 PTCHD3Q3KNS1 767 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM153CQ494X1 144 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 CCSMST1Q4G0I0 132 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 COLEC12Q5KU26 742 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 RNF187Q5TA31 235 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 CPZQ66K79 652 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 TRMT10CQ7L0Y3 403 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 TMEM151BQ8IW70 566 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 DNAJC22Q8N4W6 341 aa12.23□□□□□ -0.45
SEC61A1-206ENST00000491668 ENDOVQ8N8Q3 282 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms