RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 FCRL6Q6DN72 434 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 FIGLAQ6QHK4 219 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 SDCCAG8Q86SQ7 713 aaPredicted RBP17.65■□□□□ 0.42
SMIM4-205ENST00000491607 LRRC6Q86X45 466 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 GALNT16Q8N428 558 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 RBMXL3Q8N7X1 1067 aaKnown RBP17.65■□□□□ 0.42
SMIM4-205ENST00000491607 Q8NA96 180 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 DENND1AQ8TEH3 1009 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 PNPLA2Q96AD5 504 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 MFSD3Q96ES6 412 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 FOPNLQ96NB1 174 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 MRFAP1Q9Y605 127 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 SPTBP11277 2137 aa17.65■□□□□ 0.42
SMIM4-205ENST00000491607 KRT87PA6NCN2 255 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 MASP2O00187 686 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 CEP104O60308 925 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 AGFG2O95081 481 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 C1orf105O95561 183 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 UMODP07911 640 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 GP1BBP13224 206 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 MCM3P25205 808 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 FMO4P31512 558 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 CXCR5P32302 372 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 TRIP13Q15645 432 aaPredicted RBP17.64■□□□□ 0.41
SMIM4-205ENST00000491607 CCSMST1Q4G0I0 132 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 CTSL3PQ5NE16 218 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 FHL5Q5TD97 284 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 MRNIPQ6NTE8 343 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 PPP1R32Q7Z5V6 425 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 TMEM151BQ8IW70 566 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 TTC29Q8NA56 475 aaPredicted RBP17.64■□□□□ 0.41
SMIM4-205ENST00000491607 FAM136AQ96C01 138 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 SELENOSQ9BQE4 189 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 LRRC4CQ9HCJ2 640 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 SLC22A11Q9NSA0 550 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 CUTCQ9NTM9 273 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 C5AR2Q9P296 337 aa17.64■□□□□ 0.41
SMIM4-205ENST00000491607 PFDN6O15212 129 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 PIM1P11309 404 aaPredicted RBP17.63■□□□□ 0.41
SMIM4-205ENST00000491607 ITGAXP20702 1163 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 PSMB5P28074 263 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 CCNFP41002 786 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 GRM7Q14831 915 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 MYBPC3Q14896 1274 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 TCTE1Q5JU00 501 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 LRRC8BQ6P9F7 803 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 METTL27Q8N6F8 245 aaPredicted RBP17.63■□□□□ 0.41
SMIM4-205ENST00000491607 TRIM58Q8NG06 486 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 MIPEPQ99797 713 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 KIFC1Q9BW19 673 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 MRM3Q9HC36 420 aaKnown RBP17.63■□□□□ 0.41
SMIM4-205ENST00000491607 CDC23Q9UJX2 597 aa17.63■□□□□ 0.41
SMIM4-205ENST00000491607 TCRBV7S3A2A0A539 114 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 AGPSO00116 658 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 DSCR3O14972 297 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 KLHL41O60662 606 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 NIPSNAP2O75323 286 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 TPSB2P20231 275 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 ARNTP27540 789 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 GCGRP47871 477 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 VPS41P49754 854 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 VSX2P58304 361 aaPredicted RBP17.62■□□□□ 0.41
SMIM4-205ENST00000491607 CDK16Q00536 496 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 TPSAB1Q15661 275 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 RNF187Q5TA31 235 aaPredicted RBP17.62■□□□□ 0.41
SMIM4-205ENST00000491607 YOD1Q5VVQ6 348 aaPredicted RBP17.62■□□□□ 0.41
SMIM4-205ENST00000491607 OVCH1Q7RTY7 1134 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 MAGEC3Q8TD91 643 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.62■□□□□ 0.41
SMIM4-205ENST00000491607 LPGAT1Q92604 370 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 ZUFSPQ96AP4 578 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 FKBP10Q96AY3 582 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 BIRC8Q96P09 236 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 PSMG3-AS1Q96PY0 264 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 SLC29A3Q9BZD2 475 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 ATP13A2Q9NQ11 1180 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 HOMER3Q9NSC5 361 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 SOX13Q9UN79 622 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 CRYL1Q9Y2S2 319 aa17.62■□□□□ 0.41
SMIM4-205ENST00000491607 PTPN13Q12923 2485 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 TCP11X1B4DZS4 312 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 TARM1B6A8C7 271 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 PRICKLE3O43900 615 aaPredicted RBP17.61■□□□□ 0.41
SMIM4-205ENST00000491607 CTSVO60911 334 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 AVILO75366 819 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 IPO13O94829 963 aaKnown RBP17.61■□□□□ 0.41
SMIM4-205ENST00000491607 FKBP9O95302 570 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 CHRM3P20309 590 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 ITGA3P26006 1051 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 VARSP26640 1264 aaKnown RBP17.61■□□□□ 0.41
SMIM4-205ENST00000491607 NKG7Q16617 165 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 PLEKHN1Q494U1 663 aaPredicted RBP17.61■□□□□ 0.41
SMIM4-205ENST00000491607 CASC4Q6P4E1 433 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 ZNF662Q6ZS27 426 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 SHISA6Q6ZSJ9 500 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 IQCKQ8N0W5 287 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 OR2L3Q8NG85 312 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 TM9SF4Q92544 642 aa17.61■□□□□ 0.41
SMIM4-205ENST00000491607 ILKAPQ9H0C8 392 aaPredicted RBP17.61■□□□□ 0.41
SMIM4-205ENST00000491607 SOX17Q9H6I2 414 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms