RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 SLMAPQ14BN4 828 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 UBAP2Q5T6F2 1119 aaKnown RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TMEM207Q6UWW9 146 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 BPHLQ86WA6 291 aaPredicted RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CEP97Q8IW35 865 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FAM20CQ8IXL6 584 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NKAPQ8N5F7 415 aaKnown RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 OR8K5Q8NH50 307 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MCOLN3Q8TDD5 553 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SMPDL3AQ92484 453 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZNF501Q96CX3 271 aaPredicted RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TSPAN17Q96FV3 270 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TCTN2Q96GX1 697 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CYTH2Q99418 400 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SLC12A9Q9BXP2 914 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CAB39LQ9H9S4 337 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PARVBQ9HBI1 364 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SYTL2Q9HCH5 934 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PDE10AQ9Y233 779 aa15.7■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 STK17BO94768 372 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DLGAP3O95886 979 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MSL3P1P0C860 447 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MAGP20916 626 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ITPKBP27987 946 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SF1Q15637 639 aaKnown RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZIC1Q15915 447 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 BROXQ5VW32 411 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CDHR3Q6ZTQ4 885 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DTX1Q86Y01 620 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SYTL1Q8IYJ3 562 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZNF480Q8WV37 535 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DLG3Q92796 817 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PDLIM5Q96HC4 596 aaKnown RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CCDC138Q96M89 665 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FCRL4Q96PJ5 515 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FUT8Q9BYC5 575 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ULBP3Q9BZM4 244 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SPRY4Q9C004 299 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CHRNA10Q9GZZ6 450 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ACSS3Q9H6R3 686 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 GPAMQ9HCL2 828 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 INTS7Q9NVH2 962 aaKnown RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 WDR70Q9NW82 654 aa15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TMEM184BQ9Y519 407 aaPredicted RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TPRP12270 2363 aaKnown RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MAP1BP46821 2468 aaKnown RBP15.69■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PABPN1LA6NDY0 278 aaKnown RBP15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TMEM150CB9EJG8 249 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 RAD1O60671 282 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 KIAA0754O94854 1291 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 STMN1P16949 149 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 IMPA1P29218 277 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 RPA3P35244 121 aaPredicted RBP15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ATP1A2P50993 1020 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TLE3Q04726 772 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TSTA3Q13630 321 aaPredicted RBP15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TGIF1Q15583 401 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PHKG1Q16816 387 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 KIAA1614Q5VZ46 1190 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SUSD1Q6UWL2 747 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PPFIBP2Q8ND30 876 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 OR2L3Q8NG85 312 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 OR2A1Q8NGT9 310 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 HNRNPLLQ8WVV9 542 aaKnown RBP15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MIPEPQ99797 713 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FAM60AQ9NP50 221 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 STOX2Q9P2F5 926 aaPredicted RBP15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PILRAQ9UKJ1 303 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 KLHL20Q9Y2M5 609 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SDK2Q58EX2 2172 aa15.68■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 APC2O95996 2303 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 E7ENX8 843 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PHGDHO43175 533 aaKnown RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 WISP3O95389 354 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TIAF1O95411 115 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ENO2P09104 434 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 HIST1H2AGP0C0S8 130 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZNF28P17035 718 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 HIST1H2ADP20671 130 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CMPK1P30085 196 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TAP2Q03519 686 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MAP7Q14244 749 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NAA25Q14CX7 972 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZKSCAN8Q15776 578 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 UAP1Q16222 522 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DEFB110Q30KQ9 67 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PWWP2BQ6NUJ5 590 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FIGLAQ6QHK4 219 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MBOAT1Q6ZNC8 495 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TMEM126BQ8IUX1 230 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CACNA2D3Q8IZS8 1091 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NLGN4XQ8N0W4 816 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 EIF1ADQ8N9N8 165 aaKnown RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NLGN4YQ8NFZ3 816 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ANKRD49Q8WVL7 239 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ANKRD7Q92527 254 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 N4BP2L2Q92802 583 aaPredicted RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MRRFQ96E11 262 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms