RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 ISLR2Q6UXK2 745 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 KCNMB4Q86W47 210 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 OR2L8Q8NGY9 312 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 FLVCR1-AS1Q8TAF5 88 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 GRHL3Q8TE85 626 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 INPP5DQ92835 1189 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 RANBP9Q96S59 729 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 CRB3Q9BUF7 120 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 OLAHQ9NV23 265 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 SUCOQ9UBS9 1254 aaKnown RBP11.3□□□□□ -0.6
FDPS-215ENST00000490140 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 OSGIN2Q9Y236 505 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 HS3ST3B1Q9Y662 390 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
FDPS-215ENST00000490140 PCSK5Q92824 1860 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 MDC1Q14676 2089 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 ZGRF1Q86YA3 2104 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 BHMG1C9JSJ3 638 aaPredicted RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 E7EVH7 732 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 SOCS6O14544 535 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 HCRTR1O43613 425 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 PHF2O75151 1096 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 CNOT3O75175 753 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 HPP00738 406 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 ERVK-10P10266 1014 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 TPH1P17752 444 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 PSMA3P25788 255 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 FOXN2P32314 431 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 HSPA14Q0VDF9 509 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 MFAP5Q13361 173 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 FASTKD1Q53R41 847 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 RPUSD3Q6P087 351 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 PPP1R21Q6ZMI0 780 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 SYCE1Q8N0S2 351 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 MAGEC3Q8TD91 643 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 PEX13Q92968 403 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 ZUFSPQ96AP4 578 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 RAD51AP1Q96B01 352 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 FOPNLQ96NB1 174 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 LMF1Q96S06 567 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 SPSB2Q99619 263 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 NRTNQ99748 197 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 SLX1AQ9BQ83 275 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 CARD6Q9BX69 1037 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 TSPY26PQ9H489 355 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 ENAMQ9NRM1 1142 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 IMPACTQ9P2X3 320 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
FDPS-215ENST00000490140 PLAGL1Q9UM63 463 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 NTNG1Q9Y2I2 539 aa11.29□□□□□ -0.6
FDPS-215ENST00000490140 TRAV17A0A0B4J275 112 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 CCDC162PA2VCL2 907 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 FITM1A5D6W6 292 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 RASGRF2O14827 1237 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 VPS26AO75436 327 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 STSP08842 583 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 PRSS56P0CW18 603 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 CXCR2P25025 360 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 PEBP1P30086 187 aaKnown RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 CCNFP41002 786 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 GCGRP47871 477 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 TTPAP49638 278 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 ARG2P78540 354 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.28□□□□□ -0.66e-12■■■□□ 15.8
FDPS-215ENST00000490140 FIGLAQ6QHK4 219 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 KIRREL2Q6UWL6 708 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 PARP9Q8IXQ6 854 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 KBTBD2Q8IY47 623 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 OR11G2Q8NGC1 345 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 OR6P1Q8NGX9 317 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 CFAP61Q8NHU2 1237 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 SUN3Q8TAQ9 357 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 SKA2Q8WVK7 121 aaPredicted RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 MAGEB10Q96LZ2 347 aaPredicted RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 ZBTB20Q9HC78 741 aaPredicted RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 UTP6Q9NYH9 597 aaKnown RBP11.28□□□□□ -0.6
FDPS-215ENST00000490140 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 CDC14AQ9UNH5 594 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 PRSS21Q9Y6M0 314 aa11.28□□□□□ -0.6
FDPS-215ENST00000490140 NSG1A0A0A6YYJ2 146 aa11.27□□□□□ -0.61
FDPS-215ENST00000490140 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
FDPS-215ENST00000490140 PRSS44E7EML9 344 aa11.27□□□□□ -0.61
FDPS-215ENST00000490140 E2F3O00716 465 aa11.27□□□□□ -0.61
FDPS-215ENST00000490140 PFDN6O15212 129 aa11.27□□□□□ -0.61
FDPS-215ENST00000490140 FBLP22087 321 aaKnown RBP11.27□□□□□ -0.61
FDPS-215ENST00000490140 ADRA1DP25100 572 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms