RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 RAPH1Q70E73 1250 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 RAB11FIP2Q7L804 512 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 CLEC14AQ86T13 490 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 ISCA2Q86U28 154 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 KLHDC8AQ8IYD2 350 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 BMPERQ8N8U9 685 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 LMNTD1Q8N9Z9 388 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 OR2A1Q8NGT9 310 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 ACMSDQ8TDX5 336 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 HNRNPLLQ8WVV9 542 aaKnown RBP16.85■□□□□ 0.29
ERCC3-207ENST00000490062 ATL1Q8WXF7 558 aa16.85■□□□□ 0.29
ERCC3-207ENST00000490062 TMEM121BQ9BXQ6 578 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-207ENST00000490062 STOX2Q9P2F5 926 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-207ENST00000490062 IGHV5-51A0A0C4DH38 117 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 A0A0J9YY10 115 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 GSAPA4D1B5 854 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 PLD2O14939 933 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 KIF1CO43896 1103 aaKnown RBP16.84■□□□□ 0.29
ERCC3-207ENST00000490062 CCND1P24385 295 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 CSTF2P33240 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERCC3-207ENST00000490062 HNMTP50135 292 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 CSHL1Q14406 222 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 NAA25Q14CX7 972 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 TSNQ15631 228 aaKnown RBP16.84■□□□□ 0.29
ERCC3-207ENST00000490062 FAM83EQ2M2I3 478 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 FAM92BQ6ZTR7 304 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 LSMEM2Q8N112 164 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 D2HGDHQ8N465 521 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 RCBTB1Q8NDN9 531 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 STAG3L4Q8TBR4 150 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 PTERQ96BW5 349 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 GPR78Q96P69 363 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 TRAPPC9Q96Q05 1148 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 SGPP1Q9BX95 441 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 ENAMQ9NRM1 1142 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 LOXL2Q9Y4K0 774 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 ADAMTS20P59510 1910 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 PCM1Q15154 2024 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 ANKRD12Q6UB98 2062 aa16.84■□□□□ 0.29
ERCC3-207ENST00000490062 KRT87PA6NCN2 255 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 NPEPPSL1A6NEC2 478 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ERLIN1O75477 346 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 SNRNP200O75643 2136 aaKnown RBP16.83■□□□□ 0.28
ERCC3-207ENST00000490062 MPSTP25325 297 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 PPM1FP49593 454 aaPredicted RBP16.83■□□□□ 0.28
ERCC3-207ENST00000490062 HSD11B2P80365 405 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 FASTKQ14296 549 aaKnown RBP16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ACAP2Q15057 778 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 TGFBIQ15582 683 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ZXDCQ2QGD7 858 aaPredicted RBP16.83■□□□□ 0.28
ERCC3-207ENST00000490062 TSNAXIP1Q2TAA8 658 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 CYB5D1Q6P9G0 228 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 AGTRAPQ6RW13 159 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 FBXO39Q8N4B4 442 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 OR56A3Q8NH54 315 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 GATA6Q92908 595 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 NXPE2Q96DL1 559 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ATOH8Q96SQ7 321 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 FBXO8Q9NRD0 319 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ARL15Q9NXU5 204 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 ANKMY1Q9P2S6 941 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 PCDHB11Q9Y5F2 797 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 PCDHGA3Q9Y5H0 932 aa16.83■□□□□ 0.28
ERCC3-207ENST00000490062 PABPN1LA6NDY0 278 aaKnown RBP16.82■□□□□ 0.28
ERCC3-207ENST00000490062 TRABD2BA6NFA1 517 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 ISM1B1AKI9 464 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 TARM1B6A8C7 271 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 KERAO60938 352 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 RASSF9O75901 435 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 SYF2O95926 243 aaKnown RBP16.82■□□□□ 0.28
ERCC3-207ENST00000490062 ANXA5P08758 320 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 TFEBP19484 476 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 SPINK2P20155 84 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 CDH3P22223 829 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 GGT5P36269 586 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 ABATP80404 500 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 MC2RQ01718 297 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 RELAQ04206 551 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 PRDX1Q06830 199 aaKnown RBP16.82■□□□□ 0.28
ERCC3-207ENST00000490062 OR4D1Q15615 310 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 SH2D5Q6ZV89 423 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 BPHLQ86WA6 291 aaPredicted RBP16.82■□□□□ 0.28
ERCC3-207ENST00000490062 MARCH9Q86YJ5 346 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 SYTL1Q8IYJ3 562 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 TCAIMQ8N3R3 496 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 PDPRQ8NCN5 879 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 OR2L3Q8NG85 312 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 KCTD4Q8WVF5 259 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 ZUFSPQ96AP4 578 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 NXNL1Q96CM4 212 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 PPM1MQ96MI6 270 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 SLC46A1Q96NT5 459 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 KLHL3Q9UH77 587 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 CIDEBQ9UHD4 219 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 LGALS13Q9UHV8 139 aa16.82■□□□□ 0.28
ERCC3-207ENST00000490062 ACSL6Q9UKU0 697 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms