RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 TMCO1Q9UM00 188 aa10.55□□□□□ -0.72
TFF3-203ENST00000489676 PCNX2A6NKB5 2137 aa10.55□□□□□ -0.72
TFF3-203ENST00000489676 CPED1A4D0V7 1026 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 LRRC14BA6NHZ5 514 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 SMIM24O75264 130 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 IPO13O94829 963 aaKnown RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 SIX3O95343 332 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 LDOC1O95751 146 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 PROS1P07225 676 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 GP1BAP07359 652 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 CHRM5P08912 532 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 MYL2P10916 166 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 GFAPP14136 432 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 EPORP19235 508 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 NR1D1P20393 614 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 ATP5F1P24539 256 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 CD1CP29017 333 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 HPDP32754 393 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 PRKAA2P54646 552 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 OR1D5P58170 312 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 PPP1CAP62136 330 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 GPLD1P80108 840 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 DAB2P98082 770 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 CFHR1Q03591 330 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 SQSTM1Q13501 440 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 PCBP2Q15366 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
TFF3-203ENST00000489676 PFKFB4Q16877 469 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 PTCHD3Q3KNS1 767 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 FBXO48Q5FWF7 155 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 METTL2BQ6P1Q9 378 aaKnown RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 SYTL1Q8IYJ3 562 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 KIAA2013Q8IYS2 634 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 OR4E2Q8NGC2 313 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 ESAMQ96AP7 390 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 PYCR2Q96C36 320 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 L3HYPDHQ96EM0 354 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 TMEM237Q96Q45 408 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 OR4K3Q96R72 315 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 SLC38A3Q99624 504 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 CDC6Q99741 560 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 CCDC3Q9BQI4 270 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 RAB33BQ9H082 229 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 ATG10Q9H0Y0 220 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 EVA1BQ9NVM1 165 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 OXSMQ9NWU1 459 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 KCNK4Q9NYG8 393 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 WWOXQ9NZC7 414 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 EPHA6Q9UF33 1036 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 POMT2Q9UKY4 750 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 ADAMTS20P59510 1910 aa10.54□□□□□ -0.72
TFF3-203ENST00000489676 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
TFF3-203ENST00000489676 A0A1W2PQM1 296 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 OR6C74A6NCV1 312 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 PABPN1LA6NDY0 278 aaKnown RBP10.53□□□□□ -0.72
TFF3-203ENST00000489676 ZNF839A8K0R7 811 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 MATN2O00339 956 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
TFF3-203ENST00000489676 E2F3O00716 465 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 SLC30A4O14863 429 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 TNFSF14O43557 240 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 DKK1O94907 266 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 C9P02748 559 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 BPGMP07738 259 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 CPA3P15088 417 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 POLR2CP19387 275 aaPredicted RBP10.53□□□□□ -0.72
TFF3-203ENST00000489676 TAC1P20366 129 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 CSRP1P21291 193 aaKnown RBP10.53□□□□□ -0.72
TFF3-203ENST00000489676 KCNA4P22459 653 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 PSMB5P28074 263 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 ALDH3A1P30838 453 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 SERPINB4P48594 390 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 HSPA7P48741 367 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 DNAJB13P59910 316 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 HERVK_113P63132 956 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 BIRC2Q13490 618 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 NAE1Q13564 534 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 KIR2DS3Q14952 304 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 HSP90B2PQ58FF3 399 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 SUSD1Q6UWL2 747 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 LRRC70Q7Z2Q7 622 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 TAX1BP1Q86VP1 789 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 OOSP2Q86WS3 158 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 C10orf107Q8IVU9 208 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 RAB42Q8N4Z0 105 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 C2orf73Q8N5S3 287 aaPredicted RBP10.53□□□□□ -0.72
TFF3-203ENST00000489676 ANKRD42Q8N9B4 389 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 OR2A1Q8NGT9 310 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 MDM1Q8TC05 714 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 CCDC126Q96EE4 140 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 PHF21BQ96EK2 531 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 OR2A14Q96R47 310 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 MECRQ9BV79 373 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 ERVK-6Q9BXR3 956 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 PITPNM3Q9BZ71 974 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 CD244Q9BZW8 370 aa10.53□□□□□ -0.72
TFF3-203ENST00000489676 CNOT10Q9H9A5 744 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms