RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SP1P08047 785 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 ICAM2P13598 275 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 AKT1P31749 480 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 SERPINB6P35237 376 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 MTIF2P46199 727 aaKnown RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 AP2B1P63010 937 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 PPP2R5EQ16537 467 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 CLEC16AQ2KHT3 1053 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 TIGD7Q6NT04 549 aaPredicted RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 UNC5AQ6ZN44 842 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 CXorf67Q86X51 503 aaPredicted RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 PSTKQ8IV42 348 aaKnown RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 LIX1LQ8IVB5 337 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 DDHD1Q8NEL9 900 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 OR5M3Q8NGP4 307 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 FLVCR1-AS1Q8TAF5 88 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 ZNF354BQ96LW1 612 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 CSPG4P5Q96PW8 444 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 SECISBP2Q96T21 854 aaKnown RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 STK33Q9BYT3 514 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 SLC6A16Q9GZN6 736 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 KCNAB3O43448 404 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 SIX3O95343 332 aaPredicted RBP14.27□□□□□ -0.13
UFD1-209ENST00000489406 UCHL3P15374 230 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 MSH3P20585 1137 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 UQCRC1P31930 480 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 ZFP36L2P47974 494 aaKnown RBP14.27□□□□□ -0.13
UFD1-209ENST00000489406 GRM7Q14831 915 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 MAPKAPK3Q16644 382 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 EMC4Q5J8M3 183 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 YOD1Q5VVQ6 348 aaPredicted RBP14.27□□□□□ -0.13
UFD1-209ENST00000489406 SLC25A25Q6KCM7 469 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 NT5DC3Q86UY8 548 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 FAM222BQ8WU58 562 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 TMEM125Q96AQ2 219 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 TRIB3Q96RU7 358 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 ZNF700Q9H0M5 742 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 AMACRQ9UHK6 382 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 SPO11Q9Y5K1 396 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 ALG6Q9Y672 507 aa14.27□□□□□ -0.13
UFD1-209ENST00000489406 PHF3Q92576 2039 aaKnown RBP14.26□□□□□ -0.13
UFD1-209ENST00000489406 CHRM5P08912 532 aaPredicted RBP14.26□□□□□ -0.13
UFD1-209ENST00000489406 OC90Q02509 493 aaPredicted RBP14.26□□□□□ -0.13
UFD1-209ENST00000489406 DAZAP2Q15038 168 aaPredicted RBP14.26□□□□□ -0.13
UFD1-209ENST00000489406 FAM151BQ6UXP7 276 aa14.26□□□□□ -0.13
UFD1-209ENST00000489406 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
UFD1-209ENST00000489406 TTC29Q8NA56 475 aaPredicted RBP14.26□□□□□ -0.13
UFD1-209ENST00000489406 IMMP1LQ96LU5 166 aa14.26□□□□□ -0.13
UFD1-209ENST00000489406 MVB12BQ9H7P6 319 aa14.26□□□□□ -0.13
UFD1-209ENST00000489406 KLHL33A6NCF5 533 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 ISM1B1AKI9 464 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 IFRD1O00458 451 aaPredicted RBP14.25□□□□□ -0.13
UFD1-209ENST00000489406 BIN1O00499 593 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 FFAR3O14843 346 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 TFECO14948 347 aaPredicted RBP14.25□□□□□ -0.13
UFD1-209ENST00000489406 GPR42O15529 346 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 PRMT3O60678 531 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 SNRNP200O75643 2136 aaKnown RBP14.25□□□□□ -0.13
UFD1-209ENST00000489406 RNF8O76064 485 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 MED26O95402 600 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 MAGP20916 626 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 GRIA3P42263 894 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 FAM214AQ32MH5 1076 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 UNC5DQ6UXZ4 953 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 WDR53Q7Z5U6 358 aaPredicted RBP14.25□□□□□ -0.13
UFD1-209ENST00000489406 CRLF3Q8IUI8 442 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 LRRC49Q8IUZ0 686 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 OLFM1Q99784 485 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 SARGQ9BW04 601 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 YIPF2Q9BWQ6 316 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 MEGF8Q7Z7M0 2845 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 ARID1AO14497 2285 aa14.25□□□□□ -0.13
UFD1-209ENST00000489406 LOC102723996A0A087X1L8 192 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 A0A0G2JNJ9 132 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 MAN1A2O60476 641 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 NEURL1O76050 574 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 PDE9AO76083 593 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 SUN1O94901 812 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 HEXBP07686 556 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 BMP7P18075 431 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 SHMT2P34897 504 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 BOP1Q14137 746 aaKnown RBP14.24□□□□□ -0.13
UFD1-209ENST00000489406 PCSK7Q16549 785 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 YTHDF3Q7Z739 585 aaKnown RBP14.24□□□□□ -0.13
UFD1-209ENST00000489406 HM13Q8TCT9 377 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 HSPH1Q92598 858 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 ZNF592Q92610 1267 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 TUBB6Q9BUF5 446 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 OR52A5Q9H2C5 316 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 Q9UFV3 132 aa14.24□□□□□ -0.13
UFD1-209ENST00000489406 HOOK1Q9UJC3 728 aaKnown RBP14.24□□□□□ -0.13
UFD1-209ENST00000489406 IGLV3-12A0A075B6K2 115 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms