RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MIPEPQ99797 713 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 NLNQ9BYT8 704 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 EURLQ9NYK6 297 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 ASIC3Q9UHC3 531 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 SPENQ96T58 3664 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 ARHGEF33A8MVX0 844 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 C9J4A7 227 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 MKRN2OSH3BPM6 223 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 PFDN6O15212 129 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 USP1O94782 785 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 RAB40ALP0C0E4 278 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 AGXTP21549 392 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 OTX2P32243 289 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 MAGEA3P43357 314 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 CCL11P51671 97 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 TSTA3Q13630 321 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-206ENST00000489142 GBX1Q14549 363 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 FIGLAQ6QHK4 219 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 MCATQ8IVS2 390 aaKnown RBP13.47□□□□□ -0.25
VTI1A-206ENST00000489142 PPIL6Q8IXY8 311 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 DTWD1Q8N5C7 304 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 ACAT2Q9BWD1 397 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 RAB11FIP5Q9BXF6 653 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 IARS2Q9NSE4 1012 aaKnown RBP13.47□□□□□ -0.25
VTI1A-206ENST00000489142 INTS10Q9NVR2 710 aaKnown RBP13.47□□□□□ -0.25
VTI1A-206ENST00000489142 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
VTI1A-206ENST00000489142 MYO18BQ8IUG5 2567 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 H3BMM5 538 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 WISP1O95388 367 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 MATN4O95460 622 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 RECKO95980 971 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 HBQ1P09105 142 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ALAS2P22557 587 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 CLCN7P51798 805 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ADARP55265 1226 aaKnown RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 DHX9Q08211 1270 aaKnown RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 PTK6Q13882 451 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 LONRF1Q17RB8 773 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 MSS51Q4VC12 460 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 HP1BP3Q5SSJ5 553 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 SUSD1Q6UWL2 747 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ASB18Q6ZVZ8 466 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 METTL27Q8N6F8 245 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 PPFIBP2Q8ND30 876 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 THAP4Q8WY91 577 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 SEC14L1Q92503 715 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 SLC22A18Q96BI1 424 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 NDC1Q9BTX1 674 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 CHRNA10Q9GZZ6 450 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ING2Q9H160 280 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ACSS2Q9NR19 701 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 TXLNGQ9NUQ3 528 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 ABCF3Q9NUQ8 709 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 GPN3Q9UHW5 284 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-206ENST00000489142 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 AP1M2Q9Y6Q5 423 aa13.46□□□□□ -0.25
VTI1A-206ENST00000489142 A0A1W2PPV9 198 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 MAGEB16A2A368 324 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 A6NL46 340 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 MASP2O00187 686 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 CES2O00748 559 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 DNALI1O14645 258 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-206ENST00000489142 CTSVO60911 334 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 KLF7O75840 302 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-206ENST00000489142 HAUS5O94927 633 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 ERVK-10P10266 1014 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 ITGAXP20702 1163 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 CCNFP41002 786 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-206ENST00000489142 GNG11P61952 73 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 KCNC4Q03721 635 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 RAPSNQ13702 412 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 CRYMQ14894 314 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 IGFBP7Q16270 282 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 FRMPD2BQ6IN97 320 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 TLDC1Q6P9B6 456 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 IGDCC3Q8IVU1 814 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 RAB42Q8N4Z0 105 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
VTI1A-206ENST00000489142 OR2L3Q8NG85 312 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-206ENST00000489142 PKP4Q99569 1192 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 NDNQ99608 321 aa13.45□□□□□ -0.26
VTI1A-206ENST00000489142 GPR21Q99679 349 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms