RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GMNNO75496 209 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CPSF4O95639 269 aaKnown RBP12.35□□□□□ -0.43
CLIC4-202ENST00000488683 NUDT7P0C024 238 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 MSH3P20585 1137 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 HLCSP50747 726 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 DEFB103AP81534 67 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CCNYL2Q5T2Q4 361 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 MACC1Q6ZN28 852 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 Q6ZPB1 254 aaPredicted RBP12.35□□□□□ -0.43
CLIC4-202ENST00000488683 TBC1D15Q8TC07 691 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 USP7Q93009 1102 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 ZBTB18Q99592 522 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 NRTNQ99748 197 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 NTMT1Q9BV86 223 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 HIPK3Q9H422 1215 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 SERHLQ9NQF3 203 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 TRBV5-3A0A0A0MS03 114 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 H0YAE9 185 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 PER2O15055 1255 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 SOD2P04179 222 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 TNFRSF1BP20333 461 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 MAP4P27816 1152 aaKnown RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 HLA-FP30511 346 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 SPAM1P38567 509 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 VEPH1Q14D04 833 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 SPCS2Q15005 226 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 RUNDC3AQ59EK9 446 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 MAL2Q969L2 176 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 FAM120BQ96EK7 910 aaKnown RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 C2orf49Q9BVC5 232 aaPredicted RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 DENND4CQ5VZ89 1909 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 EBLN1P0CF75 366 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 SDC1P18827 310 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 CRHBPP24387 322 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 DCKP27707 260 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 PBLDP30039 288 aaPredicted RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 HALP42357 657 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 CCR3P51677 355 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 PLA2G16P53816 162 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 RPS14P62263 151 aaKnown RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 ABRQ12979 859 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 AQP6Q13520 282 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 RAPSNQ13702 412 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 CACHD1Q5VU97 1274 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 RETSATQ6NUM9 610 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 DHRS4L2Q6PKH6 230 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 HTATIP2Q9BUP3 242 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 RIBC2Q9H4K1 309 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
CLIC4-202ENST00000488683 C1orf109Q9NX04 203 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 INSL5Q9Y5Q6 135 aa12.34□□□□□ -0.43
CLIC4-202ENST00000488683 SLC28A1O00337 649 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 CLDN9O95484 217 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 NTRK1P04629 796 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 SRCP12931 536 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 DCTP40126 519 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 PREPP48147 710 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 DGCR6Q14129 220 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 ACDQ96AP0 544 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 MED8Q96G25 268 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 DEFB118Q96PH6 123 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 DOK1Q99704 481 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 ELOVL6Q9H5J4 265 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 RASSF1Q9NS23 344 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 TRPS1Q9UHF7 1281 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 HCFC2Q9Y5Z7 792 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 AGAP14A8MT82 685 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 TEX28O15482 410 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 OLFM2O95897 454 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 ABCB1P08183 1280 aaPredicted RBP12.33□□□□□ -0.44
CLIC4-202ENST00000488683 CD22P20273 847 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 FUT4P22083 530 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 DGKEP52429 567 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 PPP2R2BQ00005 443 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 IL5RAQ01344 420 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 NFATC3Q12968 1075 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 PLEKHG6Q3KR16 790 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 TPGS2Q68CL5 300 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 ZCCHC8Q6NZY4 707 aaKnown RBP12.33□□□□□ -0.44
CLIC4-202ENST00000488683 THAP5Q7Z6K1 395 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 MICU2Q8IYU8 434 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 C8orf59Q8N0T1 100 aaPredicted RBP12.33□□□□□ -0.44
CLIC4-202ENST00000488683 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
CLIC4-202ENST00000488683 SAMD11Q96NU1 681 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms