RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PCDHGA6Q9Y5G7 932 aa15.36■□□□□ 0.05
CTDSP1-209ENST00000488627 KLK4Q9Y5K2 254 aa15.36■□□□□ 0.05
CTDSP1-209ENST00000488627 MRPS18BQ9Y676 258 aaKnown RBP15.36■□□□□ 0.05
CTDSP1-209ENST00000488627 ATMQ13315 3056 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 ZNF891A8MT65 544 aaPredicted RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 EIF3FO00303 357 aaPredicted RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 NDC80O14777 642 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 MAP3K7O43318 606 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 VPS26AO75436 327 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 CCNYL3P0C7X3 344 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 SKIV2L2P42285 1042 aaKnown RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 ITGA1P56199 1179 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 SF1Q15637 639 aaKnown RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 TBR1Q16650 682 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 DEFB110Q30KQ9 67 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 CRTC2Q53ET0 693 aaPredicted RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 FCRL6Q6DN72 434 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 PIWIL4Q7Z3Z4 852 aaKnown RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 OR2A1Q8NGT9 310 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 GABPB2Q8TAK5 448 aaPredicted RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 STARD8Q92502 1023 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 DLG3Q92796 817 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 EXTL1Q92935 676 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 RUFY1Q96T51 708 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 SPRTNQ9H040 489 aaPredicted RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 FANCEQ9HB96 536 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 PPANQ9NQ55 473 aaKnown RBP15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 PCMTD2Q9NV79 361 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 PSAT1Q9Y617 370 aa15.35■□□□□ 0.05
CTDSP1-209ENST00000488627 MEN1O00255 615 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ZNF749O43361 778 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 FKBP9O95302 570 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 CATP04040 527 aaKnown RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 TCN2P20062 427 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 MCM3P25205 808 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 PSMB5P28074 263 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 GRIA3P42263 894 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 PGGT1BP53609 377 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 YBX1P67809 324 aaKnown RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 MGAT5Q09328 741 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 DNASE1L3Q13609 305 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ARHGAP19Q14CB8 494 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 TAF1BQ53T94 588 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ZNF385CQ66K41 422 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 UGT3A1Q6NUS8 523 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 FIGLAQ6QHK4 219 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 PAQR3Q6TCH7 311 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ZDHHC24Q6UX98 284 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 LRRC56Q8IYG6 542 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ZBED8Q8IZ13 594 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 DSELQ8IZU8 1212 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 EXD3Q8N9H8 876 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 EEF1AKMT1Q8WVE0 214 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 MCMBPQ9BTE3 642 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 SEMA4CQ9C0C4 833 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ACTR5Q9H9F9 607 aaPredicted RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 ENAMQ9NRM1 1142 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 TAS2R13Q9NYV9 303 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 TRMT6Q9UJA5 497 aaKnown RBP15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 KCND3Q9UK17 655 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 PLCL2Q9UPR0 1127 aa15.34■□□□□ 0.05
CTDSP1-209ENST00000488627 TARM1B6A8C7 271 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 C21orf140B9A014 251 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 E7EQ34 232 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.045e-6■□□□□ 8.9
CTDSP1-209ENST00000488627 C1QL1O75973 258 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 TSPAN12O95859 305 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 SLC16A8O95907 504 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 RECKO95980 971 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 PRB1P04280 392 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 CAPN1P07384 714 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 CYP2A7P20853 494 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 LY6DQ14210 128 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 HECTD2Q5U5R9 776 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 MCATQ8IVS2 390 aaKnown RBP15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 RAB42Q8N4Z0 105 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 OR2L3Q8NG85 312 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 ZNF480Q8WV37 535 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 ZUFSPQ96AP4 578 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 CHST8Q9H2A9 424 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 SMYD2Q9NRG4 433 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 EURLQ9NYK6 297 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 UTP11Q9Y3A2 253 aaKnown RBP15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 ATRXP46100 2492 aa15.33■□□□□ 0.04
CTDSP1-209ENST00000488627 SPTBP11277 2137 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 E7ENX8 843 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 ZBTB14O43829 449 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 NRP2O60462 931 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 CTSVO60911 334 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 KATNA1O75449 491 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 OR2B3O76000 313 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 URI1O94763 535 aaPredicted RBP15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 C1QAP02745 245 aa15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 KLK3P07288 261 aaPredicted RBP15.32■□□□□ 0.04
CTDSP1-209ENST00000488627 FURINP09958 794 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms