RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 LMNTD1Q8N9Z9 388 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 DLG3Q92796 817 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 UBXN10Q96LJ8 280 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 OR2A14Q96R47 310 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 INTS7Q9NVH2 962 aaKnown RBP15.21■□□□□ 0.03
C9orf3-219ENST00000488186 SOHLH2Q9NX45 425 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 SATB2Q9UPW6 733 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 PCDHB11Q9Y5F2 797 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 A0A0J9YY10 115 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 SLC9B1P1A6NJY1 282 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 EFCAB7A8K855 629 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 PLD2O14939 933 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 CDH16O75309 829 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 KLHL2O95198 593 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ZBTB11O95625 1053 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 CAPNS1P04632 268 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ANKRD34CP0C6C1 535 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 TFEBP19484 476 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 MAPK10P53779 464 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 GABREP78334 506 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 HSD11B2P80365 405 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 FASTKQ14296 549 aaKnown RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 C16orf72Q14CZ0 275 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 IGF2-ASQ6U949 168 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 SUSD1Q6UWL2 747 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 KMT5CQ86Y97 462 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 LINC01555Q8NAE3 123 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 PPFIBP2Q8ND30 876 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 HMGCLL1Q8TB92 370 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 STAG3L4Q8TBR4 150 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 EPS8L3Q8TE67 593 aaKnown RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 DENND1AQ8TEH3 1009 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ZNF480Q8WV37 535 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 KCTD4Q8WVF5 259 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 N4BP2L2Q92802 583 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 NXNL1Q96CM4 212 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 MED8Q96G25 268 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 SCYL1Q96KG9 808 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 MENTQ9BUN1 341 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ROPN1BQ9BZX4 212 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ATG10Q9H0Y0 220 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ZNF768Q9H5H4 540 aaKnown RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ALG9Q9H6U8 611 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 POLR1BQ9H9Y6 1135 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 ROPN1Q9HAT0 212 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 CD274Q9NZQ7 290 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 STOX2Q9P2F5 926 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-219ENST00000488186 PISDQ9UG56 409 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 PLAAQ9Y263 795 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 OARD1Q9Y530 152 aa15.2■□□□□ 0.02
C9orf3-219ENST00000488186 IGHV5-51A0A0C4DH38 117 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 TRABD2BA6NFA1 517 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NCF1BA6NI72 391 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NCF1CA8MVU1 366 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 CCNDBP1O95273 360 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 WISP3O95389 354 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NUDT17P0C025 328 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 COL6A2P12110 1019 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NCF1P14598 390 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 IMPA1P29218 277 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 CMPK1P30085 196 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 MLLT3P42568 568 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 IRF9Q00978 393 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 FOXM1Q08050 763 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NAE1Q13564 534 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 ACAP2Q15057 778 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 SLC5A12Q1EHB4 618 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 TMEM164Q5U3C3 297 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 CYB5D1Q6P9G0 228 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 AGTRAPQ6RW13 159 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 SBSNQ6UWP8 590 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 MBOAT1Q6ZNC8 495 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 TDRPQ86YL5 185 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 RASGRP3Q8IV61 690 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 LSMEM2Q8N112 164 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 KDF1Q8NAX2 398 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 KLHL6Q8WZ60 621 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 EXT2Q93063 718 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 KIAA1191Q96A73 305 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 NXPE2Q96DL1 559 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 MIPEPQ99797 713 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 ACAT2Q9BWD1 397 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 KLHL25Q9H0H3 589 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 PDE7BQ9NP56 450 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 CCDC177Q9NQR7 707 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-219ENST00000488186 SLC39A1Q9NY26 324 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 IKZF3Q9UKT9 509 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 ASPMQ8IZT6 3477 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 IGF2RP11717 2491 aa15.19■□□□□ 0.02
C9orf3-219ENST00000488186 MAP1BP46821 2468 aaKnown RBP15.18■□□□□ 0.02
C9orf3-219ENST00000488186 CCDC151A5D8V7 595 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 E7ENX8 843 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 TNFSF15O95150 251 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 FKBP9O95302 570 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 HGFP14210 728 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms