RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SDF2L1Q9HCN8 221 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 ACKR4Q9NPB9 350 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 EQTNQ9NQ60 294 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 ECHDC1Q9NTX5 307 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 ARGLU1Q9NWB6 273 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 DPP3Q9NY33 737 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 HAO2Q9NYQ3 351 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SPAG9O60271 1321 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 RAD54L2Q9Y4B4 1467 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 CFAP74Q9C0B2 1584 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 A0A1W2PRB8 838 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPY2A6NKD2 308 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 DUXAA6NLW8 204 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 OR6C76A6NM76 312 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 MPHOSPH10O00566 681 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CLIC2O15247 247 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CIDEAO60543 219 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PSMD10O75832 226 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPY3P0CV98 308 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPY8P0CW00 308 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PNMA6AP0CW24 399 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 FGF5P12034 268 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PAX1P15863 534 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 ERCC2P18074 760 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PCGF2P35227 344 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC9A3P48764 834 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CLK1P49759 484 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF41P51814 821 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PPP5CP53041 499 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RWDD2BP57060 319 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TUBB4BP68371 445 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPY1Q01534 308 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PNRC1Q12796 327 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RALGDSQ12967 914 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 HSPB3Q12988 150 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TECRLQ5HYJ1 363 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 MDH1BQ5I0G3 518 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 WDR38Q5JTN6 314 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 C9orf50Q5SZB4 431 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC183Q5T5S1 534 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RNASEH2BQ5TBB1 312 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 GRTP1Q5TC63 336 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SFMBT2Q5VUG0 894 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CORO6Q6QEF8 472 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 LEKR1Q6ZMV7 388 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 DGLUCYQ7Z3D6 616 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SLFN11Q7Z7L1 901 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 COMMD2Q86X83 199 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 DNAJC22Q8N4W6 341 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 CPSF7Q8N684 471 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 STPG4Q8N801 248 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 XXYLT1Q8NBI6 393 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 OR5M8Q8NGP6 311 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RNF128Q8TEB7 428 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TCP11Q8WWU5 503 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SLAMF9Q96A28 289 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 VPS33AQ96AX1 596 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 MYADMQ96S97 322 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPAN18Q96SJ8 248 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SH3GL3Q99963 347 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 RHNO1Q9BSD3 238 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 THUMPD2Q9BTF0 503 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 FUCA2Q9BTY2 467 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 LMF2Q9BU23 707 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC25A23Q9BV35 468 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 WNT5BQ9H1J7 359 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 NOL11Q9H8H0 719 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 OLAHQ9NV23 265 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 LCMT1Q9UIC8 334 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 PYCARDQ9ULZ3 195 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC7A7Q9UM01 511 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 SMCHD1A6NHR9 2005 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 NOTCH4Q99466 2003 aa3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 POLR3AO14802 1390 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-217ENST00000488087 MYOM2P54296 1465 aa3.59□□□□□ -1.84
ECHDC1-217ENST00000488087 ABCC10Q5T3U5 1492 aa3.59□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC141Q6ZP82 1450 aa3.59□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM72CH0Y354 149 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 IGKV3-20P01619 116 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 OR2T7P0C7T2 308 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SCG2P13521 617 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 GCFC2P16383 781 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 MX1P20591 662 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 EEF1B2P24534 225 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 DCTP40126 519 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PRPHP41219 470 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 MTHFRP42898 656 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PDX1P52945 283 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 CX3CL1P78423 397 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PDIA5Q14554 519 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 COG2Q14746 738 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PTPRCAPQ14761 206 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 TNIP1Q15025 636 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 DNAJC21Q5F1R6 531 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM72AQ5TYM5 149 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 KRT39Q6A163 491 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM72DQ6L9T8 149 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms