RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC28A1O00337 649 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 FBP2O00757 339 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 RGS14O43566 566 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 APBB3O95704 486 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PDYNP01213 254 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 RPN2P04844 631 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SNRPB2P08579 225 aaKnown RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 KELP23276 732 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PRPH2P23942 346 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 NUDT2P50583 147 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 CLCNKAP51800 687 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PNLIPRP1P54315 467 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ZNF33BQ06732 778 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 UBXN2BQ14CS0 331 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 NR6A1Q15406 480 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 KIF19Q2TAC6 998 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PDCD4Q53EL6 469 aaKnown RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 KIAA0895LQ68EN5 471 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 GRHL2Q6ISB3 625 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 CAPN13Q6MZZ7 669 aaPredicted RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 RGL4Q8IZJ4 473 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ARHGAP24Q8N264 748 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PGBD3Q8N328 593 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 FNDC5Q8NAU1 212 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 KYQ8NBH2 561 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PHC3Q8NDX5 983 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 TSTD1Q8NFU3 115 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 OR1E3Q8WZA6 343 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 WDR34Q96EX3 536 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PDXPQ96GD0 296 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SHDQ96IW2 340 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PPP3R2Q96LZ3 170 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 WDR92Q96MX6 357 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 OR2M4Q96R27 311 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 C1orf50Q9BV19 199 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SLC25A23Q9BV35 468 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ACPTQ9BZG2 426 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SLC52A3Q9NQ40 469 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 TMEM45AQ9NWC5 275 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ASIC5Q9NY37 505 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 WSB2Q9NYS7 404 aaPredicted RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SNX6Q9UNH7 406 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 CYP8B1Q9UNU6 501 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 KCNK6Q9Y257 313 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 PLEKHM1Q9Y4G2 1056 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 HS3ST3A1Q9Y663 406 aa9.15□□□□□ -0.94
SF3B1-211ENST00000487698 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.15□□□□□ -0.94
SF3B1-211ENST00000487698 ARHGEF17Q96PE2 2063 aaPredicted RBP9.15□□□□□ -0.95
SF3B1-211ENST00000487698 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 H0YIV9 168 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 IFRD1O00458 451 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TOR1BO14657 336 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TNFRSF10CO14798 259 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 AIM2O14862 343 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NPPBP16860 134 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 GNAZP19086 355 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 RPL10P27635 214 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 AKT2P31751 481 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 HNF4AP41235 474 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 HALP42357 657 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 GNPDA1P46926 289 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 YPEL5P62699 121 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 HMGCS1Q01581 520 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 IRF8Q02556 426 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 STX5Q13190 355 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 DOC2AQ14183 400 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ARHGAP19Q14CB8 494 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 AP5B1Q2VPB7 878 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 RFTN2Q52LD8 501 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 XKR6Q5GH73 641 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 FRG2Q64ET8 278 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 PGM2L1Q6PCE3 622 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ULK2Q8IYT8 1036 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TBC1D21Q8IYX1 336 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 DEFB107AQ8IZN7 70 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 WDR20Q8TBZ3 569 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 NEIL2Q969S2 332 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TOE1Q96GM8 510 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 FRG2BQ96QU4 278 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 HHIPQ96QV1 700 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 FOXQ1Q9C009 403 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CHRDQ9H2X0 955 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 TRIT1Q9H3H1 467 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ELOVL6Q9H5J4 265 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CARS2Q9HA77 564 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 EFCAB1Q9HAE3 211 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ZIM2Q9NZV7 527 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 PNMA8BQ9ULN7 279 aaPredicted RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SH2B3Q9UQQ2 575 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 KCNE2Q9Y6J6 123 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 SNRNP200O75643 2136 aaKnown RBP9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CEP192Q8TEP8 1941 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 FAM170BA6NMN3 283 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 BBIP1A8MTZ0 92 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 CLGNO14967 610 aa9.14□□□□□ -0.95
SF3B1-211ENST00000487698 ANKRD28O15084 1053 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms