RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR1D4P47884 311 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 DNAJC21Q5F1R6 531 aaKnown RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 YOD1Q5VVQ6 348 aaPredicted RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 RPUSD3Q6P087 351 aaKnown RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 TAX1BP1Q86VP1 789 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 DTWD1Q8N5C7 304 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 SLC22A18Q96BI1 424 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 VPS50Q96JG6 964 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 ZNF285Q96NJ3 590 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 IL17FQ96PD4 163 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 TRIM56Q9BRZ2 755 aaKnown RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 LRRC40Q9H9A6 602 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 PCDHA3Q9Y5H8 950 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 DOCK10Q96BY6 2186 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 DIDO1Q9BTC0 2240 aaKnown RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 CCDC162PA2VCL2 907 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 MROH6A6NGR9 719 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR1I1O60431 355 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 METTL18O95568 372 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 S1PR4O95977 384 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 GRB7Q14451 532 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 PARP6Q2NL67 630 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 ZC3H12BQ5HYM0 836 aaKnown RBP18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 TCTE1Q5JU00 501 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 ZNF324BQ6AW86 544 aaPredicted RBP18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 ARHGEF18Q6ZSZ5 1173 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 VRK3Q8IV63 474 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 SLC22A15Q8IZD6 547 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 TTC29Q8NA56 475 aaPredicted RBP18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 RELTQ969Z4 430 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 ALS2CR12Q96Q35 445 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 LMF1Q96S06 567 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 SELENOSQ9BQE4 189 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 CRB3Q9BUF7 120 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 ENAMQ9NRM1 1142 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 INTS7Q9NVH2 962 aaKnown RBP18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 MAU2Q9Y6X3 613 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 APCP25054 2843 aa18.61■□□□□ 0.57
SMPDL3A-202ENST00000487215 FITM1A5D6W6 292 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 HPP00738 406 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 CCR7P32248 378 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 TDGF1P3P51864 188 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 KCNK10P57789 538 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 AADACL2Q6P093 401 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 FIGLAQ6QHK4 219 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 DCUN1D3Q8IWE4 304 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR1N1Q8NGS0 311 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 MAGEB10Q96LZ2 347 aaPredicted RBP18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 TSPY26PQ9H489 355 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 ZNF160Q9HCG1 818 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 IL1RAPL1Q9NZN1 696 aa18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 ANKRD17O75179 2603 aaKnown RBP18.6■□□□□ 0.57
SMPDL3A-202ENST00000487215 HEATR9A2RTY3 570 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 AKR1B15C9JRZ8 316 aaPredicted RBP18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 PCDH17O14917 1159 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 MED26O95402 600 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 GRNP28799 593 aaKnown RBP18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 KLC1Q07866 573 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 HSPA14Q0VDF9 509 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 SF1Q15637 639 aaKnown RBP18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 CCDC38Q502W7 563 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 NLRP9Q7RTR0 991 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR2L8Q8NGY9 312 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 CFAP61Q8NHU2 1237 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 LKAAEAR1Q8TD35 194 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 TAAR6Q96RI8 345 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 RUBCNLQ9H714 662 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 FBN2P35556 2912 aa18.59■□□□□ 0.57
SMPDL3A-202ENST00000487215 MAP2K7O14733 419 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 CTSVO60911 334 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF189O75820 626 aaPredicted RBP18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 TJP3O95049 919 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 RPN2P04844 631 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 ACPPP15309 386 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 CARSP49589 748 aaKnown RBP18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 ARG2P78540 354 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 ART3Q13508 389 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 FAM214AQ32MH5 1076 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 PRSS58Q8IYP2 241 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 FAM71DQ8N9W8 422 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 OR13J1Q8NGT2 312 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 STT3BQ8TCJ2 826 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 ITLN2Q8WWU7 325 aaPredicted RBP18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 NR4A3Q92570 626 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 C8orf44Q96CB5 159 aa18.58■□□□□ 0.56
SMPDL3A-202ENST00000487215 HYKKA2RU49 373 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 F8W8V4 182 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 RASGRF2O14827 1237 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 GPC4O75487 556 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 USP1O94782 785 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 GOT2P00505 430 aaKnown RBP18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZGLP1P0C6A0 271 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 SOX11P35716 441 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 RWDD2BP57060 319 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 VSX2P58304 361 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 WASHC2DQ5SRD0 308 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 FRMPD2BQ6IN97 320 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms