RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FAM20CQ8IXL6 584 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.428e-6■□□□□ 11.2
CHMP3-208ENST00000486404 LMNTD1Q8N9Z9 388 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 DLG3Q92796 817 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 SNF8Q96H20 258 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 RUFY1Q96T51 708 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 EBNA1BP2Q99848 306 aaKnown RBP12.41□□□□□ -0.42
CHMP3-208ENST00000486404 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 MENTQ9BUN1 341 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 SLC25A18Q9H1K4 315 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 FAM60AQ9NP50 221 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 PCMTD2Q9NV79 361 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 GPN3Q9UHW5 284 aaPredicted RBP12.41□□□□□ -0.42
CHMP3-208ENST00000486404 TRMT6Q9UJA5 497 aaKnown RBP12.41□□□□□ -0.42
CHMP3-208ENST00000486404 TUBD1Q9UJT1 453 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 PLCL2Q9UPR0 1127 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 CHMP2BQ9UQN3 213 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 KLHL20Q9Y2M5 609 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 KRT87PA6NCN2 255 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF839A8K0R7 811 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ARHGEF33A8MVX0 844 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 NDC80O14777 642 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 TTI1O43156 1089 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 BANF1O75531 89 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 SYF2O95926 243 aaKnown RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 RAB40ALP0C0E4 278 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ENO3P13929 434 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 PLA2G2AP14555 144 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 PSMB5P28074 263 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 CLCN7P51798 805 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ARL4CP56559 192 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 IL10RAQ13651 578 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 GBX1Q14549 363 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 NCF4Q15080 339 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 HIF1AQ16665 826 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 UGT8Q16880 541 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 CCSMST1Q4G0I0 132 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 C1orf189Q5VU69 101 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 TLDC1Q6P9B6 456 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 NEK10Q6ZWH5 1172 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF655Q8N720 491 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 TTC29Q8NA56 475 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 PROKR1Q8TCW9 393 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 GPR21Q99679 349 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 NLNQ9BYT8 704 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 AKIRIN1Q9H9L7 192 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 STARD5Q9NSY2 213 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ZC3H7BQ9UGR2 993 aaKnown RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 FARSAQ9Y285 508 aaKnown RBP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHMP3-208ENST00000486404 ANKRD12Q6UB98 2062 aa12.4□□□□□ -0.42
CHMP3-208ENST00000486404 HEATR5BQ9P2D3 2071 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 CCDC88CQ9P219 2028 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 PABPN1LA6NDY0 278 aaKnown RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 MYO1CO00159 1063 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 PSIP1O75475 530 aaKnown RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 CCNDBP1O95273 360 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 MATN4O95460 622 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 CMPK1P30085 196 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 ITGA8P53708 1063 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 PMS2P54278 862 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 LRRC8EQ6NSJ5 796 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 RHBDD2Q6NTF9 364 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 UGT3A1Q6NUS8 523 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 CPNE9Q8IYJ1 553 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 C2CD4AQ8NCU7 369 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 GIMAP7Q8NHV1 300 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 HMGCLL1Q8TB92 370 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 DENND1AQ8TEH3 1009 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 THAP4Q8WY91 577 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 SMPDL3AQ92484 453 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 INPP5DQ92835 1189 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 CERS2Q96G23 380 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 KRT12Q99456 494 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 NDNQ99608 321 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 MIPEPQ99797 713 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 SELENOSQ9BQE4 189 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-208ENST00000486404 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 GALPQ9UBC7 116 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 KCNMB2Q9Y691 235 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
CHMP3-208ENST00000486404 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 RECKO95980 971 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 FURINP09958 794 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms