RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 WDR74Q6RFH5 385 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 CES3Q6UWW8 571 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM83HQ6ZRV2 1179 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TMEM26Q6ZUK4 368 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 C11orf96Q7Z7L8 435 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC9B2Q86UD5 537 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 NUDCD3Q8IVD9 361 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 NLGN4XQ8N0W4 816 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC25A41Q8N5S1 370 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 NLGN4YQ8NFZ3 816 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 GLYATL1Q969I3 302 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 C7orf26Q96N11 449 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 NRTNQ99748 197 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TSSK1BQ9BXA7 367 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TRIM55Q9BYV6 548 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR63Q9BZJ6 419 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 FAM96AQ9H5X1 160 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TRIM39Q9HCM9 518 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SNX15Q9NRS6 342 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TLK1Q9UKI8 766 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 FBXO5Q9UKT4 447 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 RRP15Q9Y3B9 282 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 USH1CQ9Y6N9 552 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 A0A087X1B8 175 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 A0A096LPK6 155 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 C2orf81A6NN90 581 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PDZK1P1A8MUH7 402 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CHUKO15111 745 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PFDN6O15212 129 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PLIN3O60664 434 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TIAF1O95411 115 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 NTRK1P04629 796 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PYGLP06737 847 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF7P17097 686 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 OGNP20774 298 aaKnown RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 ARNTP27540 789 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC26A3P40879 764 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CSRP3P50461 194 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CTSCP53634 463 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CORO7P57737 925 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PRAMEP78395 509 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 FOXM1Q08050 763 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 ASPHQ12797 758 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 KCNAB2Q13303 367 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 SETDB1Q15047 1291 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TAF1AQ15573 450 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CHRNA6Q15825 494 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 MRNIPQ6NTE8 343 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 XKR5Q6UX68 686 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 ATG14Q6ZNE5 492 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM92BQ6ZTR7 304 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TRPM8Q7Z2W7 1104 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 SDCCAG8Q86SQ7 713 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TTC30BQ8N4P2 665 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TRAM1L1Q8N609 369 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 BEND7Q8N7W2 519 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 GALNT6Q8NCL4 622 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 CCT6BQ92526 530 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC45A3Q96JT2 553 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TCF12Q99081 682 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 ASPSCR1Q9BZE9 553 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 RMI1Q9H9A7 625 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 GPN2Q9H9Y4 310 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 MAGEE1Q9HCI5 957 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 FBXO8Q9NRD0 319 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 THAP1Q9NVV9 213 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.14□□□□□ -0.953e-7■■□□□ 12.9
TMEM39A-208ENST00000486159 PSMD13Q9UNM6 376 aa9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 TMEM184BQ9Y519 407 aaPredicted RBP9.14□□□□□ -0.95
TMEM39A-208ENST00000486159 COL12A1Q99715 3063 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 MN1Q10571 1320 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 KIR2DS5A0A0G2JLQ3 304 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 A0A0G2JNG1 304 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CCDC189A1A4V9 331 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 RGSL1A5PLK6 1076 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF891A8MT65 544 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 KIR2DS3K7RE56 304 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 POLR1CO15160 346 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ZW10O43264 779 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 LDB2O43679 373 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ATP5HO75947 161 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 UBXN7O94888 489 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CDK14O94921 469 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 VIPP01282 170 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 C9P02748 559 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 AHSGP02765 367 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 PROCP04070 461 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 SERPINE1P05121 402 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 C2P06681 752 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 STMN1P16949 149 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 AMD1P17707 334 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 XRCC1P18887 633 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CLCNKAP51800 687 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms