RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MESP1Q9BRJ9 268 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ERP44Q9BS26 406 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ZPBPQ9BS86 351 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ASPSCR1Q9BZE9 553 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 SEMA4CQ9C0C4 833 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 OSGEPL1Q9H4B0 414 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 STN1Q9H668 368 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 C1GALT1Q9NS00 363 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 DNAJB12Q9NXW2 375 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 SPHK1Q9NYA1 384 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 OR6C2Q9NZP2 312 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 WHRNQ9P202 907 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 POMT2Q9UKY4 750 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 PLAGL1Q9UM63 463 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 SH2B3Q9UQQ2 575 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 B3GALT1Q9Y5Z6 326 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 AK5Q9Y6K8 562 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 RPS6KL1Q9Y6S9 549 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 COLEC10Q9Y6Z7 277 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 FLNCQ14315 2725 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 GTF3C1Q12789 2109 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ESYT3A0FGR9 886 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 F8W8V4 182 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 H3BMM5 538 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 K7ENP7 123 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 BTN3A1O00481 513 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 KPNA5O15131 536 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PSIP1O75475 530 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 ONECUT2O95948 504 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 RECKO95980 971 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 AHSGP02765 367 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 POLBP06746 335 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 SLC35G4P0C7Q5 338 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 LIPCP11150 499 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PKMP14618 531 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 PVRP15151 417 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 TYRP1P17643 537 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PGAM1P18669 254 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PSMB5P28074 263 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 RBMS1P29558 406 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 PRDX3P30048 256 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 CSRP3P50461 194 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ITGA8P53708 1063 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PLAURQ03405 335 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 CRYMQ14894 314 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 EFTUD2Q15029 972 aaKnown RBP eCLIP5.53□□□□□ -1.52
CUX1-208ENST00000485792 CYP2A13Q16696 494 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 LONRF1Q17RB8 773 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 COL28A1Q2UY09 1125 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 MAP9Q49MG5 647 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.53□□□□□ -1.52
CUX1-208ENST00000485792 SPANXN3Q5MJ09 141 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 HP1BP3Q5SSJ5 553 aaPredicted RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 TEDDM1Q5T9Z0 273 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 FAM69BQ5VUD6 431 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 IZUMO3Q5VZ72 239 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ZNF449Q6P9G9 518 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 KLHL35Q6PF15 583 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 INO80CQ6PI98 192 aaPredicted RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 C19orf48Q6RUI8 117 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 TMEM207Q6UWW9 146 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 UNC5AQ6ZN44 842 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 MAATS1Q7Z4T9 603 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 VASH2Q86V25 355 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ZFAND4Q86XD8 727 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 RELL1Q8IUW5 271 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 KLHL7Q8IXQ5 586 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 LRRC56Q8IYG6 542 aaPredicted RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 SLC38A9Q8NBW4 561 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 LSM14AQ8ND56 463 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 PHC3Q8NDX5 983 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 OR52E1Q8NGJ3 308 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 CALML6Q8TD86 181 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 EDARADDQ8WWZ3 215 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ASB11Q8WXH4 323 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ELMO1Q92556 727 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 UBXN4Q92575 508 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 KCNJ9Q92806 393 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 USP7Q93009 1102 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ART4Q93070 314 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 NKD1Q969G9 470 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.53□□□□□ -1.52
CUX1-208ENST00000485792 ZNF501Q96CX3 271 aaPredicted RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 CXorf40BQ96DE9 158 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 STAMBPL1Q96FJ0 436 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 WBP1Q96G27 269 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 SNF8Q96H20 258 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PDLIM5Q96HC4 596 aaKnown RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 LRFN5Q96NI6 719 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ZNF285Q96NJ3 590 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 PANX3Q96QZ0 392 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 OR2A14Q96R47 310 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 TTC1Q99614 292 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 MAP3K3Q99759 626 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 XKR8Q9H6D3 395 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 SYNDIG1Q9H7V2 258 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 ZDHHC18Q9NUE0 388 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 HRASLS2Q9NWW9 162 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms