RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TREX1Q9NSU2 369 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 BFARQ9NZS9 450 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 MRFAP1Q9Y605 127 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 SPTBN1Q01082 2364 aaKnown RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 A0A1B0GX78 115 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 UMODP07911 640 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 PIM1P11309 404 aaPredicted RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 GRIA3P42263 894 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 GCGRP47871 477 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 FOXL2P58012 376 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 SIX1Q15475 284 aaPredicted RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 TCTE1Q5JU00 501 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 FCRL6Q6DN72 434 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 DRICH1Q6PGQ1 229 aaPredicted RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 GSTA5Q7RTV2 222 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 OTOAQ7RTW8 1153 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 LRRC6Q86X45 466 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 RAB42Q8N4Z0 105 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 SKA2Q8WVK7 121 aaPredicted RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 MAIP1Q8WWC4 291 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 ZUFSPQ96AP4 578 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 RAD51AP1Q96B01 352 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 SLC29A3Q9BZD2 475 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 ATP13A2Q9NQ11 1180 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 SLC22A11Q9NSA0 550 aa16.46■□□□□ 0.23
SMC4-216ENST00000485645 TTC7AQ9ULT0 858 aaPredicted RBP16.46■□□□□ 0.23
SMC4-216ENST00000485645 ICE1Q9Y2F5 2266 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 TCP11X1B4DZS4 312 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 IPO13O94829 963 aaKnown RBP16.45■□□□□ 0.22
SMC4-216ENST00000485645 FKBP9O95302 570 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 C1orf105O95561 183 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 RPS3P23396 243 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMC4-216ENST00000485645 NMBRP28336 390 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 PLEKHN1Q494U1 663 aaPredicted RBP16.45■□□□□ 0.22
SMC4-216ENST00000485645 YOD1Q5VVQ6 348 aaPredicted RBP16.45■□□□□ 0.22
SMC4-216ENST00000485645 OVCH1Q7RTY7 1134 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 PPP1R32Q7Z5V6 425 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 IQCKQ8N0W5 287 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 TM9SF4Q92544 642 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 FKBP10Q96AY3 582 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 NACC2Q96BF6 587 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 FOPNLQ96NB1 174 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 ZNF552Q9H707 407 aaPredicted RBP16.45■□□□□ 0.22
SMC4-216ENST00000485645 CUTCQ9NTM9 273 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 B3GNT3Q9Y2A9 372 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 NBPF19A0A087WUL8 3843 aa16.45■□□□□ 0.22
SMC4-216ENST00000485645 TARM1B6A8C7 271 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 AGPSO00116 658 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 DSCR3O14972 297 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 PRICKLE3O43900 615 aaPredicted RBP16.44■□□□□ 0.22
SMC4-216ENST00000485645 ALBP02768 609 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 CCNFP41002 786 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 EIF3BP55884 814 aaKnown RBP16.44■□□□□ 0.22
SMC4-216ENST00000485645 SOX8P57073 446 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 GRM7Q14831 915 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 IGFL3Q6UXB1 125 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
SMC4-216ENST00000485645 TMEM151BQ8IW70 566 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 TTC29Q8NA56 475 aaPredicted RBP16.44■□□□□ 0.22
SMC4-216ENST00000485645 MAGEC3Q8TD91 643 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 SELENOSQ9BQE4 189 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 MRM3Q9HC36 420 aaKnown RBP16.44■□□□□ 0.22
SMC4-216ENST00000485645 NFS1Q9Y697 457 aa16.44■□□□□ 0.22
SMC4-216ENST00000485645 MASP2O00187 686 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 PFDN6O15212 129 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 SRPX2O60687 465 aaPredicted RBP16.43■□□□□ 0.22
SMC4-216ENST00000485645 VAPBO95292 243 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 ONECUT2O95948 504 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 FGGP02679 453 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 ITGAXP20702 1163 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 MMP11P24347 488 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 MCM3P25205 808 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 MGAT1P26572 445 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 BDKRB1P46663 353 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 KCNJ1P48048 391 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 CDK16Q00536 496 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 AIMP2Q13155 320 aaKnown RBP16.43■□□□□ 0.22
SMC4-216ENST00000485645 NKG7Q16617 165 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 EIF2S3LQ2VIR3 472 aaKnown RBP16.43■□□□□ 0.22
SMC4-216ENST00000485645 FAM214AQ32MH5 1076 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 MRNIPQ6NTE8 343 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 LRRC8BQ6P9F7 803 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 CES3Q6UWW8 571 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 ZADH2Q8N4Q0 377 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 SSC4DQ8WTU2 575 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 SNRNP40Q96DI7 357 aaKnown RBP16.43■□□□□ 0.22
SMC4-216ENST00000485645 MFSD3Q96ES6 412 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 ZNF285Q96NJ3 590 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 MIPEPQ99797 713 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 KIFC1Q9BW19 673 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 SLC26A1Q9H2B4 701 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 WDR54Q9H977 334 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 ENAMQ9NRM1 1142 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 SYBUQ9NX95 663 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 IL1RAPL1Q9NZN1 696 aa16.43■□□□□ 0.22
SMC4-216ENST00000485645 CDC23Q9UJX2 597 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms