RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 RPP40O75818 363 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 SORBS2O94875 1100 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 JUNP05412 331 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 SERPINF2P08697 491 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 UQCRBP14927 111 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TACR2P21452 398 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 FDXRP22570 491 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CAPZA2P47755 286 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PSMD8P48556 350 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 ATP4BP51164 291 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SUOXP51687 545 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 MED21Q13503 144 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 FLOT2Q14254 428 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 IHHQ14623 411 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TRIP10Q15642 601 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 USP39Q53GS9 565 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 OGFRL1Q5TC84 451 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 UTS2BQ765I0 119 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TMCO2Q7Z6W1 182 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 NLRP8Q86W28 1048 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CLHC1Q8NHS4 586 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 VANGL1Q8TAA9 524 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 ZNF461Q8TAF7 563 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 RHEBL1Q8TAI7 183 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SHKBP1Q8TBC3 707 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TOP1MTQ969P6 601 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 HHIPL1Q96JK4 782 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 MAGEH1Q9H213 219 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SUV39H2Q9H5I1 410 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 NARFLQ9H6Q4 476 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 POU2F3Q9UKI9 436 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 GBF1Q92538 1859 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 MTMR11A4FU01 709 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TCAF2A6NFQ2 919 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 GNB5O14775 395 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 UBDO15205 165 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CD3EAPO15446 510 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 BCAS2O75934 225 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 CRTAMO95727 393 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 HNRNPLP14866 589 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP16-206ENST00000485067 PTBP1P26599 531 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP16-206ENST00000485067 EIF1AXP47813 144 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 SLC11A1P49279 550 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 STX1BP61266 288 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 HERVK_113P63132 956 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CAPRIN1Q14444 709 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 KCNAB1Q14722 419 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 MGAT5BQ3V5L5 792 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CDKL4Q5MAI5 379 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SAPCD1Q5SSQ6 148 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 ZNF678Q5SXM1 525 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 RARS2Q5T160 578 aaKnown RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 SLX4IPQ5VYV7 408 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TMEM198Q66K66 360 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PRSS55Q6UWB4 352 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 RAB44Q7Z6P3 723 aaPredicted RBP9.03□□□□□ -0.96
USP16-206ENST00000485067 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 KIAA2013Q8IYS2 634 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PQLC1Q8N2U9 271 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SNX31Q8N9S9 440 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 C11orf65Q8NCR3 313 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 ICA1LQ8NDH6 482 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 DNAJB8Q8NHS0 232 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 FAM216AQ8WUB2 273 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 CASD1Q96PB1 797 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 ERVK-6Q9BXR3 956 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 GSTO2Q9H4Y5 243 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 ARMC7Q9H6L4 198 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PDFQ9HBH1 243 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 GIMAP4Q9NUV9 329 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 SARDHQ9UL12 918 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PADI4Q9UM07 663 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 TRAF6Q9Y4K3 522 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 PCDHB7Q9Y5E2 793 aa9.03□□□□□ -0.96
USP16-206ENST00000485067 KRT87PA6NCN2 255 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 NEMP2A6NFY4 417 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 TMEM233B4DJY2 109 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 H0YIV9 168 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 ARVCFO00192 962 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 PSMD12O00232 456 aaPredicted RBP9.02□□□□□ -0.96
USP16-206ENST00000485067 TRIM38O00635 465 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 GPR171O14626 319 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 TBC1D4O60343 1298 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 TLR5O60602 858 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 NDST3O95803 873 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 ADH1CP00326 375 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 APOC1P02654 83 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 CHRM5P08912 532 aaPredicted RBP9.02□□□□□ -0.96
USP16-206ENST00000485067 ENO3P13929 434 aaPredicted RBP9.02□□□□□ -0.96
USP16-206ENST00000485067 KCNA5P22460 613 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 MAPK3P27361 379 aaPredicted RBP9.02□□□□□ -0.96
USP16-206ENST00000485067 BMI1P35226 326 aa9.02□□□□□ -0.96
USP16-206ENST00000485067 CDKN2DP55273 166 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms