RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PYCR2Q96C36 320 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ZDHHC12Q96GR4 267 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ATOH8Q96SQ7 321 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CD274Q9NZQ7 290 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 E7ENX8 843 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TK2O00142 265 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 KERAO60938 352 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CSO75390 466 aaKnown RBP17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ANXA5P08758 320 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ERGP11308 486 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 UGT2B7P16662 529 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TBPL1P62380 186 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TAP2Q03519 686 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CYP2A13Q16696 494 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TECRLQ5HYJ1 363 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CDCP2Q5VXM1 449 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 C16orf46Q6P387 395 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 TRABD2AQ86V40 505 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 SLITRK4Q8IW52 837 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 MAP3K3Q99759 626 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CPSF2Q9P2I0 782 aaKnown RBP17.24■□□□□ 0.35
CPNE1-224ENST00000483359 POMT2Q9UKY4 750 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 HYAL3O43820 417 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-224ENST00000483359 THRAP10827 490 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 JUPP14923 745 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 PRDX3P30048 256 aaKnown RBP17.23■□□□□ 0.35
CPNE1-224ENST00000483359 SEPHS1P49903 392 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 SQSTM1Q13501 440 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 NAE1Q13564 534 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 ZXDCQ2QGD7 858 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-224ENST00000483359 THEMIS2Q5TEJ8 643 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 OR2A14Q96R47 310 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 TAC3Q9UHF0 121 aa17.23■□□□□ 0.35
CPNE1-224ENST00000483359 A0A1W2PPV9 198 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 C9P02748 559 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 COL6A2P12110 1019 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 PVRP15151 417 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 CDH3P22223 829 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 INHBCP55103 352 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 YBX1P67809 324 aaKnown RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 ARHGAP19Q14CB8 494 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 SF1Q15637 639 aaKnown RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 ISXQ2M1V0 245 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 CACHD1Q5VU97 1274 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 SPESP1Q6UW49 350 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 SH2D5Q6ZV89 423 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 SMPDL3AQ92484 453 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 ESAMQ96AP7 390 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 MIPEPQ99797 713 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 RAB33BQ9H082 229 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 CCDC177Q9NQR7 707 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 EPHA6Q9UF33 1036 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 KLHL20Q9Y2M5 609 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 ZNF839A8K0R7 811 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 MATN2O00339 956 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 COPEO14579 308 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 S100BP04271 92 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 RPA3P35244 121 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 HSD17B2P37059 387 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 LSSP48449 732 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 TARDBPQ13148 414 aaKnown RBP eCLIP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 KIR2DS3Q14952 304 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 HDXQ7Z353 690 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 RAB44Q7Z6P3 723 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 LRRC56Q8IYG6 542 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 CNPY4Q8N129 248 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 FLVCR1-AS1Q8TAF5 88 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 RHEBL1Q8TAI7 183 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 HMGCLL1Q8TB92 370 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 RHBDF1Q96CC6 855 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 FBXL8Q96CD0 374 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 C12orf65Q9H3J6 166 aaKnown RBP17.22■□□□□ 0.35
CPNE1-224ENST00000483359 WWOXQ9NZC7 414 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 ENTPD2Q9Y5L3 495 aa17.22■□□□□ 0.35
CPNE1-224ENST00000483359 PTPRBP23467 1997 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 IGHV5-51A0A0C4DH38 117 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 TLCD2A6NGC4 264 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 SPAG7O75391 227 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 MYZAPP0CAP1 466 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 GFAPP14136 432 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 CREB1P16220 341 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 SPINK2P20155 84 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 OAS2P29728 719 aaKnown RBP17.21■□□□□ 0.35
CPNE1-224ENST00000483359 GDF5P43026 501 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 CDKL1Q00532 357 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 CLPPQ16740 277 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-224ENST00000483359 TMPRSS12Q86WS5 348 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 DCBLD1Q8N8Z6 715 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 SLC22A18Q96BI1 424 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 TMEM74Q96NL1 305 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 NUDT4Q9NZJ9 180 aa17.21■□□□□ 0.35
CPNE1-224ENST00000483359 SNRNP200O75643 2136 aaKnown RBP17.21■□□□□ 0.34
CPNE1-224ENST00000483359 GOLGA6L10A6NI86 522 aa17.2■□□□□ 0.34
CPNE1-224ENST00000483359 SYCE1LA8MT33 242 aa17.2■□□□□ 0.34
CPNE1-224ENST00000483359 GLRA3O75311 464 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms