RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 LRRC56Q8IYG6 542 aaPredicted RBP14.84□□□□□ -0.03
CCM2-215ENST00000482714 C4orf33Q8N1A6 199 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 NCSTNQ92542 709 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 TLCD1Q96CP7 247 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 GFM1Q96RP9 751 aaKnown RBP14.84□□□□□ -0.03
CCM2-215ENST00000482714 EGFL8Q99944 293 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 C1GALT1Q9NS00 363 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 UTP6Q9NYH9 597 aaKnown RBP14.84□□□□□ -0.03
CCM2-215ENST00000482714 CD274Q9NZQ7 290 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 OGFRQ9NZT2 677 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 SEMA5BQ9P283 1151 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 PCDHB11Q9Y5F2 797 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 CACNA1AO00555 2505 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 KNTC1P50748 2209 aa14.84□□□□□ -0.03
CCM2-215ENST00000482714 PRPF4O43172 522 aaKnown RBP eCLIP14.83□□□□□ -0.03
CCM2-215ENST00000482714 TYROBPO43914 113 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 SMIM24O75264 130 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 GUCA1CO95843 209 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 TYRP1P17643 537 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 HRH2P25021 359 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 PRDX3P30048 256 aaKnown RBP14.83□□□□□ -0.03
CCM2-215ENST00000482714 ALDH18A1P54886 795 aaKnown RBP14.83□□□□□ -0.03
CCM2-215ENST00000482714 SIM1P81133 766 aaPredicted RBP14.83□□□□□ -0.03
CCM2-215ENST00000482714 SPIDRQ14159 915 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 SLC5A12Q1EHB4 618 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 AMZ1Q400G9 498 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 N4BP2L1Q5TBK1 243 aaPredicted RBP14.83□□□□□ -0.03
CCM2-215ENST00000482714 CAPN13Q6MZZ7 669 aaPredicted RBP14.83□□□□□ -0.03
CCM2-215ENST00000482714 USP53Q70EK8 1073 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 SLC22A9Q8IVM8 553 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 LINC01555Q8NAE3 123 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 ZUFSPQ96AP4 578 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 HAUS8Q9BT25 410 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 SGPP1Q9BX95 441 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 XKR8Q9H6D3 395 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 ACTR10Q9NZ32 417 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 XPR1Q9UBH6 696 aa14.83□□□□□ -0.03
CCM2-215ENST00000482714 CNOT1A5YKK6 2376 aaKnown RBP14.83□□□□□ -0.04
CCM2-215ENST00000482714 HMGB1P1B2RPK0 211 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 STX16-NPEPL1H3BU86 382 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 STX16O14662 325 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 TM9SF1O15321 606 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 CAPN5O15484 640 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 PLIN3O60664 434 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 STK16O75716 305 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SASH3O75995 380 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 CCNDBP1O95273 360 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 FTH1P19P0C7X4 201 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 POLR2CP19387 275 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 ATP5F1P24539 256 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 GMPRP36959 345 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 PRDX1Q06830 199 aaKnown RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 NAE1Q13564 534 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCM2-215ENST00000482714 LCTLQ6UWM7 567 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 CDHR3Q6ZTQ4 885 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SLCO6A1Q86UG4 719 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 KMT5CQ86Y97 462 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 FBXO39Q8N4B4 442 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 LMNTD1Q8N9Z9 388 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 OR2A1Q8NGT9 310 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 RSC1A1Q92681 617 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 ATP6V1G3Q96LB4 118 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 TMEM74Q96NL1 305 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 IL17FQ96PD4 163 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 UNKQ9C0B0 810 aaKnown RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 CHRNA10Q9GZZ6 450 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 CCDC177Q9NQR7 707 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 ZNF446Q9NWS9 450 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 POMT2Q9UKY4 750 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 PLAGL1Q9UM63 463 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 KLK4Q9Y5K2 254 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 KCNE2Q9Y6J6 123 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 MN1Q10571 1320 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 ANKRD12Q6UB98 2062 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 A0A1W2PPV9 198 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 FOXO6A8MYZ6 492 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 ISM1B1AKI9 464 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SUPT3HB4E1H0 165 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 MAP3K7O43318 606 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SUPT3HO75486 399 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 PROCP04070 461 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SBK3P0C264 359 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 GFAPP14136 432 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 RPA3P35244 121 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 SLC6A12P48065 614 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 PPM1FP49593 454 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 NFKB2Q00653 900 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 CFHR1Q03591 330 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 RELAQ04206 551 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 ZFP36L1Q07352 338 aaKnown RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 GPS2Q13227 327 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SETDB1Q15047 1291 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 SF1Q15637 639 aaKnown RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 CDCP2Q5VXM1 449 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 NKAIN2Q5VXU1 208 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 RBM44Q6ZP01 1051 aaKnown RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 RAB44Q7Z6P3 723 aaPredicted RBP14.82□□□□□ -0.04
CCM2-215ENST00000482714 TMPRSS12Q86WS5 348 aa14.82□□□□□ -0.04
CCM2-215ENST00000482714 TCP10LQ8TDR4 215 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms