RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PPP1R3BQ86XI6 285 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 CEP97Q8IW35 865 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 LMNTD1Q8N9Z9 388 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 SMPDL3AQ92484 453 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 NAF1Q96HR8 494 aaKnown RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 HIST1H2AHQ96KK5 128 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 CCDC138Q96M89 665 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 GPR22Q99680 433 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 HIST1H2AJQ99878 128 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 H2AFJQ9BTM1 129 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 FUT8Q9BYC5 575 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 CHRNA10Q9GZZ6 450 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 KLHL25Q9H0H3 589 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 ACSS3Q9H6R3 686 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 FANCEQ9HB96 536 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 GPAMQ9HCL2 828 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 FGF21Q9NSA1 209 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 ADAMTS6Q9UKP5 1117 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 RARRES3Q9UL19 164 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 URB1O60287 2271 aaKnown RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 PABPN1LA6NDY0 278 aaKnown RBP20.17■□□□□ 0.82
SEC13-217ENST00000482647 FAM155BO75949 473 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 LIPCP11150 499 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 STMN1P16949 149 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 PNLIPRP1P54315 467 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 ZNF460Q14592 562 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.17■□□□□ 0.82
SEC13-217ENST00000482647 C19orf47Q8N9M1 422 aaKnown RBP20.17■□□□□ 0.82
SEC13-217ENST00000482647 OR8K5Q8NH50 307 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 ANKRD7Q92527 254 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 DLG3Q92796 817 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 TRIM54Q9BYV2 358 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 INTS7Q9NVH2 962 aaKnown RBP20.17■□□□□ 0.82
SEC13-217ENST00000482647 PDE10AQ9Y233 779 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 LAMA5O15230 3695 aa20.17■□□□□ 0.82
SEC13-217ENST00000482647 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 PRICKLE3O43900 615 aaPredicted RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 MSL3P1P0C860 447 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 RPA3P35244 121 aaPredicted RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 FASTKQ14296 549 aaKnown RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 EFTUD2Q15029 972 aaKnown RBP eCLIP20.16■□□□□ 0.825e-11■■■■□ 22.3
SEC13-217ENST00000482647 GPR19Q15760 415 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 TRMT10CQ7L0Y3 403 aaKnown RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 SYTL1Q8IYJ3 562 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 ZNF480Q8WV37 535 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 MRRFQ96E11 262 aaKnown RBP20.16■□□□□ 0.82
SEC13-217ENST00000482647 FCRL4Q96PJ5 515 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 CAB39LQ9H9S4 337 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 USP24Q9UPU5 2620 aa20.16■□□□□ 0.82
SEC13-217ENST00000482647 KLK10O43240 276 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 ENO2P09104 434 aaPredicted RBP20.15■□□□□ 0.82
SEC13-217ENST00000482647 RAB10P61026 200 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 CLN3Q13286 438 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 UBAP2Q5T6F2 1119 aaKnown RBP20.15■□□□□ 0.82
SEC13-217ENST00000482647 CDHR3Q6ZTQ4 885 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 FAM20CQ8IXL6 584 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 OR2A1Q8NGT9 310 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 ZUFSPQ96AP4 578 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 ZNF501Q96CX3 271 aaPredicted RBP20.15■□□□□ 0.82
SEC13-217ENST00000482647 ULBP3Q9BZM4 244 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 SERTAD3Q9UJW9 196 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 NOVA2Q9UNW9 492 aaKnown RBP20.15■□□□□ 0.82
SEC13-217ENST00000482647 IKBKGQ9Y6K9 419 aa20.15■□□□□ 0.82
SEC13-217ENST00000482647 A0A087WUV0 522 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 A0A1W2PPV9 198 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 E7ENX8 843 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 STK17BO94768 372 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 SLU7O95391 586 aaKnown RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 PMS2P54278 862 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 AP1S2P56377 157 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 TAP2Q03519 686 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 TSTA3Q13630 321 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 ZKSCAN8Q15776 578 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 ZIC1Q15915 447 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 UAP1Q16222 522 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 PHKG1Q16816 387 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 SUSD1Q6UWL2 747 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 DTX1Q86Y01 620 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 SPACA3Q8IXA5 215 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 OR2L3Q8NG85 312 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 ANKRD49Q8WVL7 239 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 N4BP2L2Q92802 583 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 MIPEPQ99797 713 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 SPRY4Q9C004 299 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 ARL15Q9NXU5 204 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 PILRAQ9UKJ1 303 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 KLHL20Q9Y2M5 609 aa20.14■□□□□ 0.81
SEC13-217ENST00000482647 TMEM184BQ9Y519 407 aaPredicted RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 DSPP15924 2871 aaKnown RBP20.14■□□□□ 0.81
SEC13-217ENST00000482647 CFAP47Q6ZTR5 3102 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 TARM1B6A8C7 271 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 TMEM150CB9EJG8 249 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 PHGDHO43175 533 aaKnown RBP20.13■□□□□ 0.81
SEC13-217ENST00000482647 FAM153BP0C7A2 387 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 MAGP20916 626 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 IMPA1P29218 277 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 CRABP2P29373 138 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 CMPK1P30085 196 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 ATP1A2P50993 1020 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms