RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SDCBP2Q9H190 292 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 PRELID1Q9Y255 219 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ASB3Q9Y575 518 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ADAMTS3O15072 1205 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC2A2P11168 524 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TRAM1Q15629 374 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 FSTL4Q6MZW2 842 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 IRF2BP2Q7Z5L9 587 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CEP97Q8IW35 865 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC13A3Q8WWT9 602 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC35A5Q9BS91 424 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TMEM5Q9Y2B1 443 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 A0A075B6Q4 140 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 AADACL2Q6P093 401 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 KCTD8Q6ZWB6 473 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 NAT16Q8N8M0 369 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CREB3L1Q96BA8 519 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ARHGEF4Q9NR80 690 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 M0R129 80 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CLDN5O00501 218 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PTPN2P17706 415 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PRKCDQ05655 676 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 HSPB3Q12988 150 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 HSDL1Q3SXM5 330 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TSTD2Q5T7W7 516 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 MBOAT1Q6ZNC8 495 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF565Q8N9K5 539 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZFAND2BQ8WV99 257 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 DENND2DQ9H6A0 471 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CPSF4LA6NMK7 179 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 XYLT1Q86Y38 959 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TIGD4Q8IY51 512 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 OR51V1Q9H2C8 321 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 NELFAQ9H3P2 528 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TRPV4Q9HBA0 871 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CRTAC1Q9NQ79 661 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 GRHL1Q9NZI5 618 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 MID1O15344 667 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CCL16O15467 120 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZBTB11O95625 1053 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 MLLT3P42568 568 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RNASE12Q5GAN4 147 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 FAM129CQ86XR2 697 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EGFL6Q8IUX8 553 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ADAM7Q9H2U9 754 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CXorf21Q9HAI6 301 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ABCG2Q9UNQ0 655 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CDH1P12830 882 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SMSP52788 366 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 NFKB2Q00653 900 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TARDBPQ13148 414 aaKnown RBP eCLIP9.35□□□□□ -0.913e-6■■■■□ 20.1
VEGFA-212ENST00000480614 ARL13AQ5H913 290 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RALGPS1Q5JS13 557 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SLC9A4Q6AI14 798 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 POMZP3Q6PJE2 187 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SERPINA9Q86WD7 417 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SLC22A15Q8IZD6 547 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PROKR2Q8NFJ6 384 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EBPLQ9BY08 206 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TFB2MQ9H5Q4 396 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PCDH7O60245 1069 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 AZGP1P25311 298 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TNFSF9P41273 254 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CDH13P55290 713 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CCL23P55773 120 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 MC1RQ01726 317 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CSTF1Q05048 431 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PTPN20Q4JDL3 420 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 MON1BQ7L1V2 547 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 HDDC3Q8N4P3 179 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RBM15BQ8NDT2 890 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 GTPBP3Q969Y2 492 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZSCAN5AQ9BUG6 496 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 POLR3BQ9NW08 1133 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 HSPA7P48741 367 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EEFSECP57772 596 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TPGS2Q68CL5 300 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ZC3HC1Q86WB0 502 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 SPERTQ8NA61 448 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 OR10A6Q8NH74 314 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CPXM1Q96SM3 734 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TMEM121BQ9BXQ6 578 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 METTL8Q9H825 291 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EMC3Q9P0I2 261 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CSNK2A2P19784 350 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ENDOUP21128 410 aaKnown RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 RHEBQ15382 184 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms