RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TEFMQ96QE5 360 aaKnown RBP10.46□□□□□ -0.73
ATG4B-219ENST00000479941 CCDC77Q9BR77 488 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 ZPBPQ9BS86 351 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 DDA1Q9BW61 102 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 TRIM54Q9BYV2 358 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 DERL2Q9GZP9 239 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 PDE7BQ9NP56 450 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 SIDT1Q9NXL6 827 aaKnown RBP10.46□□□□□ -0.73
ATG4B-219ENST00000479941 SLC39A1Q9NY26 324 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 NOVA2Q9UNW9 492 aaKnown RBP10.46□□□□□ -0.73
ATG4B-219ENST00000479941 PDE10AQ9Y233 779 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 BTRCQ9Y297 605 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 PCDHB11Q9Y5F2 797 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 PCDHGA3Q9Y5H0 932 aa10.46□□□□□ -0.73
ATG4B-219ENST00000479941 AHCTF1Q8WYP5 2266 aa10.46□□□□□ -0.74
ATG4B-219ENST00000479941 KRT87PA6NCN2 255 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 E7ENX8 843 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 POC1B-GALNT4F8VUJ3 575 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 POLR1CO15160 346 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 PHGDHO43175 533 aaKnown RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 PRICKLE3O43900 615 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 TUBBP07437 444 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CCDC166P0CW27 439 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 ST6GAL1P15907 406 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CD82P27701 267 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 IMPA1P29218 277 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 PNLIPRP1P54315 467 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 TAP2Q03519 686 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 FOXM1Q08050 763 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 BMPR2Q13873 1038 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 IL11RAQ14626 422 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 SF1Q15637 639 aaKnown RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 PHKG1Q16816 387 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 ERCC6LQ2NKX8 1250 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 DCAF12Q5T6F0 453 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 LGSNQ5TDP6 509 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 FBXO38Q6PIJ6 1188 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CEACAM20Q6UY09 585 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 ADAMTSL2Q86TH1 951 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 TAX1BP1Q86VP1 789 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 SYTL1Q8IYJ3 562 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 C2orf73Q8N5S3 287 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 LMNTD1Q8N9Z9 388 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 FGF11Q92914 225 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 USP7Q93009 1102 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 TCTN2Q96GX1 697 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 UBXN10Q96LJ8 280 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 PPM1MQ96MI6 270 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CHRNA10Q9GZZ6 450 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 INTS7Q9NVH2 962 aaKnown RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 SOHLH2Q9NX45 425 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 CTNNAL1Q9UBT7 734 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 FETUBQ9UGM5 382 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 ACSL6Q9UKU0 697 aa10.45□□□□□ -0.74
ATG4B-219ENST00000479941 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 MAP1BP46821 2468 aaKnown RBP10.45□□□□□ -0.74
ATG4B-219ENST00000479941 A0A1W2PPV9 198 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 HMX2A2RU54 273 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 C9orf172C9J069 976 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CDC7O00311 574 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 PRAMEF10O60809 474 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 KRT37O76014 449 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 MSL3P1P0C860 447 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 EBLN1P0CF75 366 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SLC35E2BP0CK96 405 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 FGF5P12034 268 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CD1DP15813 335 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CCND1P24385 295 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 TYK2P29597 1187 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SLC5A2P31639 672 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 RPA3P35244 121 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SERPINB8P50452 374 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CSRP3P50461 194 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SH3BP2P78314 561 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CDKL1Q00532 357 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 FASTKQ14296 549 aaKnown RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 NAA25Q14CX7 972 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 PPP1R3AQ16821 1122 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 TAF1BQ53T94 588 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 EMBQ6PCB8 327 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SBSNQ6UWP8 590 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 CMC1Q7Z7K0 106 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 TBC1D1Q86TI0 1168 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 TRIM73Q86UV7 250 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 PPP1R3BQ86XI6 285 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 PROSER1Q86XN7 944 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 LRRC56Q8IYG6 542 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 C19orf47Q8N9M1 422 aaKnown RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 OR2A1Q8NGT9 310 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 OR8K5Q8NH50 307 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SNIP1Q8TAD8 396 aaKnown RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 DCAKDQ8WVC6 231 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 UBLCP1Q8WVY7 318 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ATL1Q8WXF7 558 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ZCCHC14Q8WYQ9 949 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms