RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ZFYVE26Q68DK2 2539 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 FAM95CA0A1B0GW59 222 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 CXorf49A8MYA2 514 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ISM1B1AKI9 464 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 KLK10O43240 276 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ZNF37AP17032 561 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 CYP2A7P20853 494 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 SPRP35270 261 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ATP1A2P50993 1020 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 AP1S2P56377 157 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ABHD18Q0P651 414 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 SLMAPQ14BN4 828 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 CCSMST1Q4G0I0 132 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 UBE2R2Q712K3 238 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 NLGN4XQ8N0W4 816 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ESX1Q8N693 406 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 C19orf47Q8N9M1 422 aaKnown RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 NLGN4YQ8NFZ3 816 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 OR2A1Q8NGT9 310 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 NKD1Q969G9 470 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 PMEPA1Q969W9 287 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 TSPAN17Q96FV3 270 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 CCNL2Q96S94 520 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 RBBP8Q99708 897 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 NRTNQ99748 197 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 OLFM1Q99784 485 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 EFHD1Q9BUP0 239 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 ANKMY1Q9P2S6 941 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 SLC17A6Q9P2U8 582 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 SERTAD3Q9UJW9 196 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 PLAGL1Q9UM63 463 aa14.92□□□□□ -0.02
C9orf3-217ENST00000479161 RUVBL2Q9Y230 463 aaKnown RBP14.92□□□□□ -0.02
C9orf3-217ENST00000479161 A0A1W2PPV9 198 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 E7ENX8 843 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 STK17BO94768 372 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 WISP3O95389 354 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-217ENST00000479161 SLC16A8O95907 504 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 F7P08709 466 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-217ENST00000479161 EBLN1P0CF75 366 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 BDKRB1P46663 353 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 GABRA4P48169 554 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 PNLIPRP1P54315 467 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 TMPRSS3P57727 454 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 TAS2R39P59534 338 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 TAP2Q03519 686 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 KBTBD12Q3ZCT8 623 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 PIWIL4Q7Z3Z4 852 aaKnown RBP14.91□□□□□ -0.02
C9orf3-217ENST00000479161 ZFAND4Q86XD8 727 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 DNAJC22Q8N4W6 341 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 FBF1Q8TES7 1133 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.91□□□□□ -0.024e-7■■■■■ 85.1
C9orf3-217ENST00000479161 PPM1MQ96MI6 270 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 CYTH2Q99418 400 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 PKP4Q99569 1192 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 PCBD2Q9H0N5 130 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 SOHLH2Q9NX45 425 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 ITPR1Q14643 2758 aa14.91□□□□□ -0.02
C9orf3-217ENST00000479161 CACNA1GO43497 2377 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CCDC189A1A4V9 331 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 H3BMH7 237 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 RAD1O60671 282 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CCNDBP1O95273 360 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 RECKO95980 971 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 HBQ1P09105 142 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CCND1P24385 295 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 HRH2P25021 359 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 SLC26A3P40879 764 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ABATP80404 500 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 PRDX1Q06830 199 aaKnown RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 SF1Q15637 639 aaKnown RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ZKSCAN8Q15776 578 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CRTC2Q53ET0 693 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ZC3H12BQ5HYM0 836 aaKnown RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ZNF517Q6ZMY9 492 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CDHR3Q6ZTQ4 885 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 LRRC56Q8IYG6 542 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 OR2L3Q8NG85 312 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ZNF480Q8WV37 535 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 IFT81Q8WYA0 676 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 DLG3Q92796 817 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 LINGO1Q96FE5 620 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ELMO2Q96JJ3 720 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 IL17FQ96PD4 163 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CTRCQ99895 268 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 TRIM54Q9BYV2 358 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ULBP3Q9BZM4 244 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 PRORYQ9H606 182 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 ACSS3Q9H6R3 686 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 UTP6Q9NYH9 597 aaKnown RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-217ENST00000479161 PDE10AQ9Y233 779 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 AP1M2Q9Y6Q5 423 aa14.9□□□□□ -0.02
C9orf3-217ENST00000479161 MDC1Q14676 2089 aaKnown RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 K7ENP7 123 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 SRPX2O60687 465 aaPredicted RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 HIST1H2AGP0C0S8 130 aaPredicted RBP14.89□□□□□ -0.03
C9orf3-217ENST00000479161 HIST1H2ADP20671 130 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 ITPKBP27987 946 aa14.89□□□□□ -0.03
C9orf3-217ENST00000479161 IMPA1P29218 277 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms