RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 RBP1P09455 135 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 UGT2B7P16662 529 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 PSMB5P28074 263 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 TAP2Q03519 686 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 SPIDRQ14159 915 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 FBXO48Q5FWF7 155 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 IRGCQ6NXR0 463 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 KLHL35Q6PF15 583 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 AGTRAPQ6RW13 159 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 SUSD1Q6UWL2 747 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 TRIM73Q86UV7 250 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 RHBDF1Q96CC6 855 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 TLCD1Q96CP7 247 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 TGM7Q96PF1 710 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ATG10Q9H0Y0 220 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ABCG4Q9H172 646 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ACTR10Q9NZ32 417 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 LNPEPQ9UIQ6 1025 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ZNF839A8K0R7 811 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 C2orf74A8MZ97 194 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 TAPBPO15533 448 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 KIF1CO43896 1103 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 PRICKLE3O43900 615 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 TYROBPO43914 113 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 KLK8O60259 260 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 PLIN3O60664 434 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 C9P02748 559 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 PROCP04070 461 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 ANXA5P08758 320 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 KCNA4P22459 653 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 MPSTP25325 297 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 HSD17B2P37059 387 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 SLC6A12P48065 614 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 CCT5P48643 541 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 E2F1Q01094 437 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 NAE1Q13564 534 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 TSTA3Q13630 321 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 TTMPQ5BVD1 217 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 CDKL4Q5MAI5 379 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 CDCP2Q5VXM1 449 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 SPESP1Q6UW49 350 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 ZNF574Q6ZN55 896 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 B3GNT8Q7Z7M8 397 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 SLITRK4Q8IW52 837 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 UBTD2Q8WUN7 234 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 ATL1Q8WXF7 558 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 SMPDL3AQ92484 453 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 PYCR2Q96C36 320 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 MED8Q96G25 268 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 OR2A14Q96R47 310 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 SGPP1Q9BX95 441 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 CCDC177Q9NQR7 707 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 APOBEC2Q9Y235 224 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 ASB1Q9Y576 335 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 UNC13CQ8NB66 2214 aa13.09□□□□□ -0.31
NUDCD3-207ENST00000478769 IGHV5-10-1A0A0J9YXX1 117 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 MATN2O00339 956 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 S100BP04271 92 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 THRAP10827 490 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 GFAPP14136 432 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 LSSP48449 732 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 AGTR2P50052 363 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 HNMTP50135 292 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 PRKAA1Q13131 559 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 CLPPQ16740 277 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 PTCHD3Q3KNS1 767 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 HES3Q5TGS1 186 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 AGBL2Q5U5Z8 902 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 SULT1C3Q6IMI6 304 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 ARMC6Q6NXE6 501 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 PLXDC1Q8IUK5 500 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 KLHDC8AQ8IYD2 350 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 OR4D9Q8NGE8 314 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 CCDC74BQ96LY2 380 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 ACAT2Q9BWD1 397 aa13.08□□□□□ -0.32
NUDCD3-207ENST00000478769 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms