RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TRIM58Q8NG06 486 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF778Q96MU6 729 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 TCF12Q99081 682 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 NRTNQ99748 197 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 SELENOSQ9BQE4 189 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 CHRAC1Q9NRG0 131 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 FAM114A2Q9NRY5 505 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 CUTCQ9NTM9 273 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 UTP6Q9NYH9 597 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 SPATA7Q9P0W8 599 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 CDYLQ9Y232 598 aa13.88□□□□□ -0.19
SMARCE1-209ENST00000478349 BLACEA4D250 179 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF839A8K0R7 811 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 PRPF4O43172 522 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 PHF2O75151 1096 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 DDAH2O95865 285 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 TPBGLP0DKB5 382 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 ERVK-10P10266 1014 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 MMP11P24347 488 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 PEBP1P30086 187 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 RPL22P35268 128 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 UQCRFS1P47985 274 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 EIF3BP55884 814 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 SOX8P57073 446 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 RAPSNQ13702 412 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 ELOAQ14241 798 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 SLC9A5Q14940 896 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 FAM69BQ5VUD6 431 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 IGFL3Q6UXB1 125 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 LINC01555Q8NAE3 123 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 HMGCLL1Q8TB92 370 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 PSMG3-AS1Q96PY0 264 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 SLC26A1Q9H2B4 701 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 TREX1Q9NSU2 369 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 SAMD15Q9P1V8 674 aa13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 TTC7AQ9ULT0 858 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-209ENST00000478349 VPS26AO75436 327 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 FGGP02679 453 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 ESR1P03372 595 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 TPSB2P20231 275 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 ITGA3P26006 1051 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 CARSP49589 748 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 TPSAB1Q15661 275 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 TTLL9Q3SXZ7 439 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 PRMT9Q6P2P2 845 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 OVCH1Q7RTY7 1134 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 VRK3Q8IV63 474 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 RBMXL3Q8N7X1 1067 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 LMNTD1Q8N9Z9 388 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 P2RY12Q9H244 342 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 ENAMQ9NRM1 1142 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 AGPAT4Q9NRZ5 378 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 SEMA3GQ9NS98 782 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 NAV2Q8IVL1 2488 aa13.86□□□□□ -0.19
SMARCE1-209ENST00000478349 A0A0U1RQJ8 604 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 IQCF5A8MTL0 148 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 E5RI56 91 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 CCNDBP1O95273 360 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 VAPBO95292 243 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 C1orf105O95561 183 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 ONECUT2O95948 504 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 ETS1P14921 441 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 OGNP20774 298 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 CMPK1P30085 196 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 HSD17B2P37059 387 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 ADARP55265 1226 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 OCA2Q04671 838 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 RBBP7Q16576 425 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 TUBB8Q3ZCM7 444 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 PRAMEF13Q5VWM6 474 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 LRRC8BQ6P9F7 803 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 ZNF662Q6ZS27 426 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 MICALCLQ6ZW33 695 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 PPP1R32Q7Z5V6 425 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 LKAAEAR1Q8TD35 194 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 IL17FQ96PD4 163 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 MENTQ9BUN1 341 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 KIFC1Q9BW19 673 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 EPS8L2Q9H6S3 715 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 LUZP4Q9P127 313 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 MARCH4Q9P2E8 410 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 FBXL4Q9UKA2 621 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 KLK4Q9Y5K2 254 aa13.85□□□□□ -0.19
SMARCE1-209ENST00000478349 FITM1A5D6W6 292 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 HCRTR1O43613 425 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 CATP04040 527 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 UMODP07911 640 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 BDKRB1P46663 353 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 GCGRP47871 477 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 GRB7Q14451 532 aa13.84□□□□□ -0.19
SMARCE1-209ENST00000478349 ARHGAP19Q14CB8 494 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms