RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FAM8A1Q9UBU6 413 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF282Q9UDV7 671 aaPredicted RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 ICKQ9UPZ9 632 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 MAU2Q9Y6X3 613 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 FITM1A5D6W6 292 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 IDSB3KWA1 339 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 EPHB6O15197 1021 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 MFSD11O43934 449 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 MED26O95402 600 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 CHRM5P08912 532 aaPredicted RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 TPBGLP0DKB5 382 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 RARAP10276 462 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ICAM2P13598 275 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 MSH3P20585 1137 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 MCM3P25205 808 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 PTGS2P35354 604 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 CD151P48509 253 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ARSEP51690 589 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 EMP2P54851 167 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 POLR2FP61218 127 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 NKX6-1P78426 367 aaPredicted RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 FANCCQ00597 558 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 OCA2Q04671 838 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 EEF1A2Q05639 463 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 GTF3C1Q12789 2109 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 BOP1Q14137 746 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 KEAP1Q14145 624 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 GRM7Q14831 915 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 PAFAH1B3Q15102 231 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF658BQ4V348 819 aaPredicted RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM182AQ5T1J6 154 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 SHEQ5VZ18 495 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ZDHHC20Q5W0Z9 365 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 SPINK14Q6IE38 97 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 H3F3CQ6NXT2 135 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ARSKQ6UWY0 536 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM151BQ6UXP7 276 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 TMTC1Q8IUR5 882 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 METTL27Q8N6F8 245 aaPredicted RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 SIMC1Q8NDZ2 872 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 HSPH1Q92598 858 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 IMP4Q96G21 291 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 SEC16BQ96JE7 1060 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 SRPK1Q96SB4 655 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 AGPAT1Q99943 283 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF700Q9H0M5 742 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 PCDH18Q9HCL0 1135 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 NEUROD4Q9HD90 331 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 OR6C2Q9NZP2 312 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 TEKT2Q9UIF3 430 aa6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.3
SPTLC1-205ENST00000477888 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 GLYATL1P3A0A0U1RQE8 302 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 A0A1B0GTH9 108 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ANKRD33BA6NCL7 494 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 A6NNC1 897 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 A8MUI8 341 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 KCNK1O00180 336 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CRLF1O75462 422 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 HSP90AA1P07900 732 aaKnown RBP6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 UQCRHP07919 91 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CD48P09326 243 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 MAGP20916 626 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CXCR2P25025 360 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 PDHA2P29803 388 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 PEBP1P30086 187 aaKnown RBP6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 SHMT2P34897 504 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 PTGER1P34995 402 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 KIR2DL3P43628 341 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 KLK7P49862 253 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 AP2B1P63010 937 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 PMPCAQ10713 525 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 MMRN1Q13201 1228 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 SNTB1Q13884 538 aaKnown RBP6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 OR1C1Q15619 314 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 PPP2R5EQ16537 467 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM214AQ32MH5 1076 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 EMC4Q5J8M3 183 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 TCTE1Q5JU00 501 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CCDC122Q5T0U0 273 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 NCBP2-AS2Q69YL0 99 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 KDELC1Q6UW63 502 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 GALNTL5Q7Z4T8 443 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 NT5DC3Q86UY8 548 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 CD163Q86VB7 1156 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 BEST3Q8N1M1 668 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 FAM71BQ8TC56 605 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 HM13Q8TCT9 377 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF398Q8TD17 642 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 TFGQ92734 400 aaPredicted RBP6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 HGH1Q9BTY7 390 aa6.95□□□□□ -1.3
SPTLC1-205ENST00000477888 THAP2Q9H0W7 228 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms