RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 DUSP15Q9H1R2 295 aaPredicted RBP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 SAR1AQ9NR31 198 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 PCOLCE2Q9UKZ9 415 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 ATXN2Q99700 1313 aaKnown RBP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 DMTNQ08495 405 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 UBAP2LQ14157 1087 aaKnown RBP27.95■■■□□ 2.07
VEGFA-211ENST00000476772 KRT33BQ14525 404 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 METTL21CQ5VZV1 264 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 SUSD1Q6UWL2 747 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 RGL4Q8IZJ4 473 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 GPBAR1Q8TDU6 330 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 CAMK1GQ96NX5 476 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 MVB12BQ9H7P6 319 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 SPATA7Q9P0W8 599 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 LNPEPQ9UIQ6 1025 aa27.95■■■□□ 2.07
VEGFA-211ENST00000476772 PRAMEF33A0A0G2JMD5 474 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 A6NCN8 305 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 E7EQ34 232 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 FFAR3O14843 346 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 GPR42O15529 346 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 ARHGAP19Q14CB8 494 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 TMEM198Q66K66 360 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 WDR5BQ86VZ2 330 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 C2orf73Q8N5S3 287 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-211ENST00000476772 DNASE2BQ8WZ79 361 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 CCDC177Q9NQR7 707 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-211ENST00000476772 TRIM33Q9UPN9 1127 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 GON4LQ3T8J9 2241 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 TLR4O00206 839 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 CELA2BP08218 269 aaPredicted RBP27.94■■■□□ 2.06
VEGFA-211ENST00000476772 CHIT1Q13231 466 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 CYP2A13Q16696 494 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 GGTA1PQ4G0N0 100 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 L3MBTL4Q8NA19 623 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 GSDMCQ9BYG8 508 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 POLG2Q9UHN1 485 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 G3BP2Q9UN86 482 aaKnown RBP27.94■■■□□ 2.06
VEGFA-211ENST00000476772 HEBP2Q9Y5Z4 205 aa27.94■■■□□ 2.06
VEGFA-211ENST00000476772 KCNE1BA0A087WTH5 132 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 BLKP51451 505 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 XKR7Q5GH72 579 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 FAM91A1Q658Y4 838 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 IL27RAQ6UWB1 636 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 LARP4Q71RC2 724 aaKnown RBP eCLIP27.93■■■□□ 2.061e-25■□□□□ 10.3
VEGFA-211ENST00000476772 MAML2Q8IZL2 1156 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-211ENST00000476772 CHCHD4Q8N4Q1 142 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 CCDC106Q9BWC9 280 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 SLC29A3Q9BZD2 475 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 AKTIPQ9H8T0 292 aa27.93■■■□□ 2.06
VEGFA-211ENST00000476772 F3P13726 295 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 CTSEP14091 401 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 NPPBP16860 134 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 HSD17B2P37059 387 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 IRF8Q02556 426 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 BNIP1Q12981 228 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 CPSF6Q16630 551 aaKnown RBP eCLIP27.92■■■□□ 2.06
VEGFA-211ENST00000476772 C1orf210Q8IVY1 113 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 MARK4Q96L34 752 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 CATSPER2Q96P56 530 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 HBEGFQ99075 208 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 GPRC5BQ9NZH0 403 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 ZNF624Q9P2J8 865 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-211ENST00000476772 GIMAP2Q9UG22 337 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 APOBEC3BQ9UH17 382 aaKnown RBP27.92■■■□□ 2.06
VEGFA-211ENST00000476772 SH2B3Q9UQQ2 575 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 KCNE2Q9Y6J6 123 aa27.92■■■□□ 2.06
VEGFA-211ENST00000476772 CLGNO14967 610 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 WFS1O76024 890 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 JUNDP17535 347 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 CSTF1Q05048 431 aaKnown RBP27.91■■■□□ 2.06
VEGFA-211ENST00000476772 ABRAXAS2Q15018 415 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 LACTB2Q53H82 288 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-211ENST00000476772 XKR6Q5GH73 641 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 WDR45BQ5MNZ6 344 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 LPCAT2Q7L5N7 544 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 LONP2Q86WA8 852 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 TREML1Q86YW5 311 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 TMEM105Q8N8V8 129 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 OR52E1Q8NGJ3 308 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 NEIL2Q969S2 332 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 TAAR2Q9P1P5 351 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 THADAQ6YHU6 1953 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 ZNF839A8K0R7 811 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 CD22P20273 847 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 CCND1P24385 295 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 SRSF5Q13243 272 aaKnown RBP27.91■■■□□ 2.06
VEGFA-211ENST00000476772 C1orf61Q13536 156 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 PRAMEF14Q5SWL7 426 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 THEMIS2Q5TEJ8 643 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 PRAMEF13Q5VWM6 474 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 RAB42Q8N4Z0 105 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 OR2T11Q8NH01 316 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 TUBGCP3Q96CW5 907 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 MIPEPQ99797 713 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 CCT7Q99832 543 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 LRRC61Q9BV99 259 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 XKR8Q9H6D3 395 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 PFDN4Q9NQP4 134 aa27.91■■■□□ 2.06
VEGFA-211ENST00000476772 FARSBQ9NSD9 589 aaKnown RBP27.91■■■□□ 2.06
VEGFA-211ENST00000476772 DYRK1BQ9Y463 629 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms