RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TEX19Q8NA77 164 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 SLC22A18Q96BI1 424 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 KRT12Q99456 494 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 EBNA1BP2Q99848 306 aaKnown RBP15.61■□□□□ 0.09
COL1A1-205ENST00000476387 DPH2Q9BQC3 489 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-205ENST00000476387 NLNQ9BYT8 704 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 TRIM31Q9BZY9 425 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 CHRNA10Q9GZZ6 450 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 ACTR5Q9H9F9 607 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-205ENST00000476387 IARS2Q9NSE4 1012 aaKnown RBP15.61■□□□□ 0.09
COL1A1-205ENST00000476387 PCMTD2Q9NV79 361 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 FBXO5Q9UKT4 447 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 RUVBL2Q9Y230 463 aaKnown RBP15.61■□□□□ 0.09
COL1A1-205ENST00000476387 NFS1Q9Y697 457 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 COMMD10Q9Y6G5 202 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 COL12A1Q99715 3063 aa15.61■□□□□ 0.09
COL1A1-205ENST00000476387 EFCAB8A8MWE9 144 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 K7EM74 188 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 RASGRF2O14827 1237 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 SEC31AO94979 1220 aaKnown RBP15.6■□□□□ 0.09
COL1A1-205ENST00000476387 C1orf105O95561 183 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 F7P08709 466 aaPredicted RBP15.6■□□□□ 0.09
COL1A1-205ENST00000476387 HBQ1P09105 142 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 NR1D1P20393 614 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 CD9P21926 228 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 ITGA8P53708 1063 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 ETF1P62495 437 aaKnown RBP15.6■□□□□ 0.09
COL1A1-205ENST00000476387 HIF1AQ16665 826 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 SLC5A12Q1EHB4 618 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 MSS51Q4VC12 460 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 PRAMEF17Q5VTA0 474 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 TAX1BP1Q86VP1 789 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 SYTL1Q8IYJ3 562 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 GPR135Q8IZ08 494 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 OR2L8Q8NGY9 312 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 ADAMTS17Q8TE56 1095 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 KCNJ9Q92806 393 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 TCTN2Q96GX1 697 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 IL17FQ96PD4 163 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 TRIM55Q9BYV6 548 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 SLC7A5P2Q9GIP4 190 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 SNX7Q9UNH6 387 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 PCDHGA9Q9Y5G4 932 aaKnown RBP15.6■□□□□ 0.09
COL1A1-205ENST00000476387 DOPEY2Q9Y3R5 2298 aa15.6■□□□□ 0.09
COL1A1-205ENST00000476387 ANKRD12Q6UB98 2062 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 NAV2Q8IVL1 2488 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 E7EQ34 232 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 CATP04040 527 aaKnown RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 PEBP1P30086 187 aaKnown RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ARL4CP56559 192 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 MPP1Q00013 466 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 GRB7Q14451 532 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 GBX1Q14549 363 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 IGFBP7Q16270 282 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ACSBG2Q5FVE4 666 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 LCN10Q6JVE6 187 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 HIBCHQ6NVY1 386 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 FAM198BQ6UWH4 519 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 SYT10Q6XYQ8 523 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 CDHR3Q6ZTQ4 885 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 C2orf73Q8N5S3 287 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ENDOVQ8N8Q3 282 aaKnown RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 LINC01555Q8NAE3 123 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 LRRC39Q96DD0 335 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 CFAP36Q96G28 342 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 MENTQ9BUN1 341 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ING2Q9H160 280 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 MLXIPLQ9NP71 852 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ACSS2Q9NR19 701 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 FAM114A2Q9NRY5 505 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 INTS7Q9NVH2 962 aaKnown RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 KLHL42Q9P2K6 505 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 ZC3H7BQ9UGR2 993 aaKnown RBP15.59■□□□□ 0.09
COL1A1-205ENST00000476387 TCFL5Q9UL49 500 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 CHMP2BQ9UQN3 213 aa15.59■□□□□ 0.09
COL1A1-205ENST00000476387 MED13Q9UHV7 2174 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 VPS26AO75436 327 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 DNAJB5O75953 348 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 MATN4O95460 622 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 CAPN1P07384 714 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 ERVK-10P10266 1014 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 ELK3P41970 407 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 CLCN7P51798 805 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 PGDP52209 483 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 KLHL38Q2WGJ6 581 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 DEFB110Q30KQ9 67 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 CPZQ66K79 652 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 ZNF549Q6P9A3 640 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 C2CD4AQ8NCU7 369 aaPredicted RBP15.58■□□□□ 0.08
COL1A1-205ENST00000476387 BBOF1Q8ND07 529 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 FLVCR1-AS1Q8TAF5 88 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 MIB2Q96AX9 1013 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 CERS2Q96G23 380 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 C17orf62Q9BQA9 187 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 DHRS4Q9BTZ2 278 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 SLC25A23Q9BV35 468 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 PPANQ9NQ55 473 aaKnown RBP15.58■□□□□ 0.08
COL1A1-205ENST00000476387 IRAK4Q9NWZ3 460 aa15.58■□□□□ 0.08
COL1A1-205ENST00000476387 SPATA7Q9P0W8 599 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms